Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AL139158.1-201ENST00000424719 340 ntBASIC4.53□□□□□ -1.68
USF2Q15853 CRIP1P1-201ENST00000427567 185 ntBASIC4.53□□□□□ -1.68
USF2Q15853 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.53□□□□□ -1.68
USF2Q15853 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AC096775.1-201ENST00000437724 448 ntBASIC4.53□□□□□ -1.68
USF2Q15853 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AC073909.1-201ENST00000447112 999 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.53□□□□□ -1.68
USF2Q15853 AC004129.2-201ENST00000457229 287 ntBASIC4.53□□□□□ -1.68
USF2Q15853 RN7SL269P-201ENST00000467795 305 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC023245.1-201ENST00000468501 517 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC093827.1-201ENST00000480094 861 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC006539.1-201ENST00000481419 501 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.53□□□□□ -1.68
USF2Q15853 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.53□□□□□ -1.68
USF2Q15853 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AC022882.1-201ENST00000532142 501 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AL121594.2-201ENST00000541658 472 ntBASIC4.53□□□□□ -1.68
USF2Q15853 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
USF2Q15853 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.53□□□□□ -1.68
USF2Q15853 AC090515.3-201ENST00000560431 315 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC009962.1-201ENST00000567327 3813 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC127024.5-201ENST00000580085 462 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.53□□□□□ -1.68
USF2Q15853 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF2Q15853 AL513327.3-201ENST00000602618 469 ntBASIC4.53□□□□□ -1.68
USF2Q15853 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.53□□□□□ -1.68
USF2Q15853 AC090948.2-201ENST00000607363 564 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.53□□□□□ -1.68
USF2Q15853 MIR6780B-201ENST00000610307 79 ntBASIC4.53□□□□□ -1.68
USF2Q15853 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.53□□□□□ -1.68
USF2Q15853 uc_338.31-201ENST00000615595 186 ntBASIC4.53□□□□□ -1.68
USF2Q15853 AC022960.2-201ENST00000616300 666 ntBASIC4.53□□□□□ -1.68
USF2Q15853 MIR6133-201ENST00000617057 108 ntBASIC4.53□□□□□ -1.68
USF2Q15853 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
USF2Q15853 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.53□□□□□ -1.68
USF2Q15853 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF2Q15853 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USF2Q15853 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
USF2Q15853 AL034370.1-201ENST00000397254 1590 ntBASIC4.53□□□□□ -1.69
USF2Q15853 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
USF2Q15853 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.53□□□□□ -1.69
USF2Q15853 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.52□□□□□ -1.69
USF2Q15853 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.52□□□□□ -1.69
USF2Q15853 PSG10P-201ENST00000501199 1500 ntBASIC4.52□□□□□ -1.69
USF2Q15853 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 AP000756.2-201ENST00000624168 2567 ntBASIC4.52□□□□□ -1.69
USF2Q15853 SELENOWP1-201ENST00000322792 252 ntBASIC4.52□□□□□ -1.69
USF2Q15853 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 RN7SKP78-201ENST00000364711 318 ntBASIC4.52□□□□□ -1.69
USF2Q15853 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
USF2Q15853 RPL35AP3-201ENST00000414680 288 ntBASIC4.52□□□□□ -1.69
USF2Q15853 THEM7P-201ENST00000419556 672 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.52□□□□□ -1.69
USF2Q15853 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.52□□□□□ -1.69
USF2Q15853 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.52□□□□□ -1.69
USF2Q15853 NAP1L4P2-201ENST00000425958 899 ntBASIC4.52□□□□□ -1.69
USF2Q15853 TRGV7-201ENST00000427089 353 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AL353597.2-202ENST00000434901 373 ntBASIC4.52□□□□□ -1.69
USF2Q15853 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.52□□□□□ -1.69
USF2Q15853 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.52□□□□□ -1.69
USF2Q15853 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.52□□□□□ -1.69
USF2Q15853 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.52□□□□□ -1.69
USF2Q15853 AL645937.3-201ENST00000453647 936 ntBASIC4.52□□□□□ -1.69
USF2Q15853 RN7SL168P-201ENST00000463821 279 ntBASIC4.52□□□□□ -1.69
USF2Q15853 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.52□□□□□ -1.69
USF2Q15853 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 RN7SL568P-201ENST00000493069 298 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AL117692.1-201ENST00000494283 713 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AC112484.3-201ENST00000505910 329 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AL158068.1-201ENST00000506116 616 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.52□□□□□ -1.69
USF2Q15853 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.52□□□□□ -1.69
USF2Q15853 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.52□□□□□ -1.69
USF2Q15853 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.52□□□□□ -1.69
USF2Q15853 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 AC121758.1-202ENST00000556917 658 ntBASIC4.52□□□□□ -1.69
USF2Q15853 CYCSP38-201ENST00000559840 322 ntBASIC4.52□□□□□ -1.69
USF2Q15853 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.52□□□□□ -1.69
USF2Q15853 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.52□□□□□ -1.69
USF2Q15853 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.52□□□□□ -1.69
USF2Q15853 AC004801.6-201ENST00000616571 978 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AC022400.9-201ENST00000623633 273 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AL596275.2-207ENST00000641188 675 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AC138627.1-204ENST00000641894 765 ntBASIC4.52□□□□□ -1.69
USF2Q15853 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 VN2R3P-201ENST00000422626 1412 ntBASIC4.52□□□□□ -1.69
USF2Q15853 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF2Q15853 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
USF2Q15853 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
USF2Q15853 AC000374.1-201ENST00000434698 1745 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms