Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RPS23P6-201ENST00000466136 431 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 RPL7P40-201ENST00000481703 745 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 LSM3P4-201ENST00000502948 309 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP1Q04837 SNORA70.20-201ENST00000516848 126 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 AP004607.2-201ENST00000533949 322 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 YWHABP2-201ENST00000540201 713 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 AC090022.1-201ENST00000546569 311 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.41□□□□□ -1.7
SSBP1Q04837 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.41□□□□□ -1.7
SSBP1Q04837 NDUFB4P11-201ENST00000560510 395 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 AC116553.2-201ENST00000564203 463 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 MRPS21P7-201ENST00000566937 238 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP1Q04837 AC060766.1-201ENST00000590824 627 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP1Q04837 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SSBP1Q04837 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP1Q04837 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP1Q04837 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP1Q04837 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP1Q04837 AC063976.2-201ENST00000425667 3556 ntBASIC4.41□□□□□ -1.7
SSBP1Q04837 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP1Q04837 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SSBP1Q04837 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP1Q04837 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
SSBP1Q04837 AL133268.1-201ENST00000405676 1401 ntBASIC4.4□□□□□ -1.7
SSBP1Q04837 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SSBP1Q04837 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.4□□□□□ -1.7
SSBP1Q04837 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.4□□□□□ -1.7
SSBP1Q04837 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 RNU4-2-201ENST00000365668 141 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 RN7SKP199-201ENST00000410325 305 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AC245060.4-201ENST00000413293 1121 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 SRSF1P1-201ENST00000424058 520 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 RPS26P4-201ENST00000431743 355 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 GSTM5P1-201ENST00000434751 660 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.4□□□□□ -1.71
SSBP1Q04837 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AC005297.1-201ENST00000444765 862 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.4□□□□□ -1.71
SSBP1Q04837 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP1Q04837 AC091180.1-201ENST00000462104 372 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AC097173.1-201ENST00000505862 819 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 LDHAP1-201ENST00000509421 992 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 TCP11X3P-202ENST00000514289 1254 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 RNA5SP464-201ENST00000516251 108 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 RNA5SP340-201ENST00000517132 107 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.4□□□□□ -1.71
SSBP1Q04837 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 NRBF2P4-201ENST00000520874 850 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP1Q04837 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.4□□□□□ -1.71
SSBP1Q04837 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AL512310.9-201ENST00000553311 948 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP1Q04837 AL049829.3-202ENST00000604278 711 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AC124916.2-201ENST00000604416 224 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AC139792.1-201ENST00000607051 647 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 AL118522.2-201ENST00000616045 615 ntBASIC4.4□□□□□ -1.71
SSBP1Q04837 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.4□□□□□ -1.71
SSBP1Q04837 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SSBP1Q04837 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSBP1Q04837 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP1Q04837 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP1Q04837 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
SSBP1Q04837 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP1Q04837 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP1Q04837 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP1Q04837 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP1Q04837 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SSBP1Q04837 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.39□□□□□ -1.71
SSBP1Q04837 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.39□□□□□ -1.71
SSBP1Q04837 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP1Q04837 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSBP1Q04837 TMSB4XP2-201ENST00000335179 210 ntBASIC4.39□□□□□ -1.71
SSBP1Q04837 RNA5SP433-201ENST00000364491 114 ntBASIC4.39□□□□□ -1.71
SSBP1Q04837 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP1Q04837 MIR551B-201ENST00000384984 96 ntBASIC4.39□□□□□ -1.71
SSBP1Q04837 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP1Q04837 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP1Q04837 AC127526.2-201ENST00000426436 775 ntBASIC4.39□□□□□ -1.71
SSBP1Q04837 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP1Q04837 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP1Q04837 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.39□□□□□ -1.71
SSBP1Q04837 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms