Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 ICE2P1-201ENST00000512800 1849 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLRN1P58418 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CLRN1P58418 AL353743.3-201ENST00000442109 1468 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 Y_RNA.201-201ENST00000364052 96 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 RNU4-4P-201ENST00000364588 130 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 SNORA70H-201ENST00000383910 135 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 SNORA70J-201ENST00000384182 135 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 RNU5A-2P-201ENST00000384337 116 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 SNORD116-4-201ENST00000384733 96 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 MRPS21P5-201ENST00000417885 231 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 TNPO1P1-201ENST00000423641 1138 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 MTND5P2-201ENST00000442927 1142 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AL031681.1-201ENST00000443304 400 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 OR13K1P-201ENST00000444577 975 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AC092685.1-201ENST00000447960 1243 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC092967.1-201ENST00000449016 481 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 ANKRD26P4-201ENST00000455755 950 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
CLRN1P58418 OR9A1P-202ENST00000484361 945 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 RN7SL714P-201ENST00000487050 298 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.66□□□□□ -1.5
CLRN1P58418 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLRN1P58418 MTND4P2-201ENST00000507767 1203 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 MTCYBP16-201ENST00000509187 1129 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 NDUFB4P12-201ENST00000513465 390 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC084824.1-201ENST00000550917 1005 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.66□□□□□ -1.5
CLRN1P58418 AL121579.2-201ENST00000555466 590 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.66□□□□□ -1.5
CLRN1P58418 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.66□□□□□ -1.5
CLRN1P58418 AC135628.1-201ENST00000568867 534 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 RN7SL66P-201ENST00000582099 264 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 AL583856.2-201ENST00000606298 543 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 ZNF663P-202ENST00000641770 1131 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLRN1P58418 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.66□□□□□ -1.5
CLRN1P58418 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.66□□□□□ -1.5
CLRN1P58418 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLRN1P58418 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms