Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
VSX2P58304 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.2□□□□□ -1.58
VSX2P58304 CR788268.1-201ENST00000603931 1809 ntBASIC5.2□□□□□ -1.58
VSX2P58304 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.2□□□□□ -1.58
VSX2P58304 AL353796.1-201ENST00000561542 3241 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AC006484.1-201ENST00000435086 1884 ntBASIC5.2□□□□□ -1.58
VSX2P58304 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.2□□□□□ -1.58
VSX2P58304 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.2□□□□□ -1.58
VSX2P58304 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VSX2P58304 MIR133B-201ENST00000362210 119 ntBASIC5.2□□□□□ -1.58
VSX2P58304 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VSX2P58304 SNORD56.6-201ENST00000384569 71 ntBASIC5.2□□□□□ -1.58
VSX2P58304 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VSX2P58304 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 RPL7L1P9-201ENST00000431298 745 ntBASIC5.2□□□□□ -1.58
VSX2P58304 RPL5P25-201ENST00000441148 775 ntBASIC5.2□□□□□ -1.58
VSX2P58304 MED28P3-201ENST00000444288 531 ntBASIC5.2□□□□□ -1.58
VSX2P58304 LINC02210-201ENST00000444561 288 ntBASIC5.2□□□□□ -1.58
VSX2P58304 RPS23P9-201ENST00000448848 438 ntBASIC5.2□□□□□ -1.58
VSX2P58304 NPM1P19-201ENST00000450070 712 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AL606490.1-201ENST00000452266 765 ntBASIC5.2□□□□□ -1.58
VSX2P58304 PSAT1P4-201ENST00000466500 526 ntBASIC5.2□□□□□ -1.58
VSX2P58304 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VSX2P58304 RPS4XP1-201ENST00000482189 787 ntBASIC5.2□□□□□ -1.58
VSX2P58304 UBA52P7-201ENST00000486088 380 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.2□□□□□ -1.58
VSX2P58304 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.2□□□□□ -1.58
VSX2P58304 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 AC109464.1-201ENST00000511091 819 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.2□□□□□ -1.58
VSX2P58304 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.2□□□□□ -1.58
VSX2P58304 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
VSX2P58304 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 AC027216.1-201ENST00000577726 685 ntBASIC5.2□□□□□ -1.58
VSX2P58304 RBM22P1-201ENST00000578589 1214 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 AC060766.1-201ENST00000590824 627 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.2□□□□□ -1.58
VSX2P58304 AC010503.3-201ENST00000594355 540 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 Z95327.3-201ENST00000610385 572 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AC015712.7-201ENST00000615211 635 ntBASIC5.2□□□□□ -1.58
VSX2P58304 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 MIR6837-201ENST00000620884 64 ntBASIC5.2□□□□□ -1.58
VSX2P58304 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.2□□□□□ -1.58
VSX2P58304 CASC19-264ENST00000641912 1184 ntBASIC5.2□□□□□ -1.58
VSX2P58304 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.2□□□□□ -1.58
VSX2P58304 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.2□□□□□ -1.58
VSX2P58304 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 PROS2P-201ENST00000474651 1951 ntBASIC5.2□□□□□ -1.58
VSX2P58304 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VSX2P58304 AP001029.2-203ENST00000589795 4910 ntBASIC5.2□□□□□ -1.58
VSX2P58304 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VSX2P58304 AL031595.2-201ENST00000624215 19071 ntBASIC5.19□□□□□ -1.58
VSX2P58304 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.19□□□□□ -1.58
VSX2P58304 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
VSX2P58304 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.19□□□□□ -1.58
VSX2P58304 U3.28-201ENST00000391249 210 ntBASIC5.19□□□□□ -1.58
VSX2P58304 AL390774.1-201ENST00000411924 246 ntBASIC5.19□□□□□ -1.58
VSX2P58304 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSX2P58304 PRUNEP1-201ENST00000425846 705 ntBASIC5.19□□□□□ -1.58
VSX2P58304 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.19□□□□□ -1.58
VSX2P58304 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.19□□□□□ -1.58
VSX2P58304 AC138761.5-201ENST00000433967 325 ntBASIC5.19□□□□□ -1.58
VSX2P58304 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.19□□□□□ -1.58
VSX2P58304 AC011225.1-201ENST00000457751 369 ntBASIC5.19□□□□□ -1.58
VSX2P58304 RPL7P39-201ENST00000481157 744 ntBASIC5.19□□□□□ -1.58
VSX2P58304 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.19□□□□□ -1.58
VSX2P58304 RN7SL629P-201ENST00000489622 285 ntBASIC5.19□□□□□ -1.58
VSX2P58304 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.19□□□□□ -1.58
VSX2P58304 RPEP1-201ENST00000504507 658 ntBASIC5.19□□□□□ -1.58
VSX2P58304 GLUD1P3-202ENST00000508551 200 ntBASIC5.19□□□□□ -1.58
VSX2P58304 HMGB1P44-201ENST00000508597 572 ntBASIC5.19□□□□□ -1.58
VSX2P58304 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.19□□□□□ -1.58
VSX2P58304 AC020937.1-201ENST00000519677 1013 ntBASIC5.19□□□□□ -1.58
VSX2P58304 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.19□□□□□ -1.58
VSX2P58304 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.19□□□□□ -1.58
VSX2P58304 AC090286.3-201ENST00000573133 187 ntBASIC5.19□□□□□ -1.58
VSX2P58304 NPM1P45-201ENST00000583151 559 ntBASIC5.19□□□□□ -1.58
VSX2P58304 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.19□□□□□ -1.58
VSX2P58304 AP000769.2-201ENST00000602344 396 ntBASIC5.19□□□□□ -1.58
VSX2P58304 IMMP1LP3-201ENST00000604197 224 ntBASIC5.19□□□□□ -1.58
VSX2P58304 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms