Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN2P57739 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN2P57739 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN2P57739 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLDN2P57739 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN2P57739 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN2P57739 AC011933.2-201ENST00000578539 2790 ntBASIC5.59□□□□□ -1.52
CLDN2P57739 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CLDN2P57739 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN2P57739 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN2P57739 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.59□□□□□ -1.52
CLDN2P57739 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLDN2P57739 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN2P57739 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN2P57739 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CLDN2P57739 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN2P57739 CCAT2-201ENST00000630920 1752 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLDN2P57739 U3.7-201ENST00000363668 216 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 AC009804.1-201ENST00000400949 179 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN2P57739 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN2P57739 AC013410.2-201ENST00000422627 201 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 AC007563.3-201ENST00000433233 371 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 AC006326.1-201ENST00000445465 787 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 MTND6P5-201ENST00000448266 512 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 AC026348.1-201ENST00000462549 1053 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN2P57739 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN2P57739 AC010468.3-201ENST00000508225 458 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN2P57739 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN2P57739 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN2P57739 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN2P57739 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN2P57739 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN2P57739 AC093510.2-201ENST00000562820 896 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN2P57739 AC018558.5-201ENST00000565840 952 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 MIR4443-201ENST00000585052 53 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 AP004372.1-201ENST00000604842 844 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 AC025016.1-201ENST00000616746 682 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 RMST_5.1-201ENST00000618704 126 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN2P57739 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLDN2P57739 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLDN2P57739 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN2P57739 C4BPAP1-201ENST00000415474 1893 ntBASIC5.58□□□□□ -1.52
CLDN2P57739 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN2P57739 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CLDN2P57739 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CLDN2P57739 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLDN2P57739 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 AL136520.1-201ENST00000600311 1322 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CLDN2P57739 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLDN2P57739 GAPDHP24-201ENST00000328713 983 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN2P57739 SNORD1C-201ENST00000363315 78 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 RNU4-2-201ENST00000365668 141 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 RNU1-77P-201ENST00000390868 162 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 PTGES3P2-201ENST00000407942 482 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AP000534.2-201ENST00000412729 568 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN2P57739 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN2P57739 AC092651.1-201ENST00000426110 312 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN2P57739 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN2P57739 AC245517.2-201ENST00000442890 346 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AC078857.1-201ENST00000469870 667 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 COPS8P2-201ENST00000473228 627 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN2P57739 OR2AO1P-201ENST00000476497 403 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN2P57739 EIF1P7-201ENST00000487533 337 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 RPL23AP73-201ENST00000492507 471 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 GOLGA5P1-201ENST00000507317 980 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN2P57739 RN7SKP248-201ENST00000516278 305 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 RN7SKP99-201ENST00000517028 307 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CLDN2P57739 AL121594.2-201ENST00000541658 472 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 AC126615.2-201ENST00000553003 515 ntBASIC5.57□□□□□ -1.52
CLDN2P57739 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN2P57739 AGGF1P7-201ENST00000562369 913 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms