Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
GFRA1P56159 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.12□□□□□ -1.43
GFRA1P56159 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
GFRA1P56159 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 AC010894.1-201ENST00000313760 361 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 IGKV7-3-201ENST00000357453 298 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.12□□□□□ -1.43
GFRA1P56159 RNU6-517P-201ENST00000384362 110 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 Y_RNA.517-201ENST00000384551 106 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
GFRA1P56159 RNU6-1320P-201ENST00000390838 107 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RNU6-1269P-201ENST00000391139 107 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC104297.1-201ENST00000393779 870 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 FDPSP5-201ENST00000399474 1057 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 AL590635.1-201ENST00000406314 586 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 CYCSP17-201ENST00000407870 315 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RN7SKP205-201ENST00000410999 307 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC022028.1-201ENST00000412054 408 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 DUTP4-201ENST00000424782 475 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.12□□□□□ -1.43
GFRA1P56159 RPS24P1-201ENST00000438550 371 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 PA2G4P1-201ENST00000442248 1197 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AL034418.1-201ENST00000448675 860 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 AL591363.1-201ENST00000450091 483 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 SUMO2P2-201ENST00000456482 255 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC002075.1-201ENST00000457396 676 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RNU6-599P-201ENST00000459383 107 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RNU6-1193P-201ENST00000459461 107 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.12□□□□□ -1.43
GFRA1P56159 RN7SL83P-201ENST00000468131 297 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.12□□□□□ -1.43
GFRA1P56159 CBX3P3-201ENST00000508108 532 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RN7SKP196-201ENST00000516267 345 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
GFRA1P56159 HMGB1P23-201ENST00000518743 568 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC134698.4-201ENST00000523451 826 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 SNRPCP6-201ENST00000528310 210 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC007068.2-201ENST00000543168 395 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.12□□□□□ -1.43
GFRA1P56159 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.12□□□□□ -1.43
GFRA1P56159 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.12□□□□□ -1.43
GFRA1P56159 AC036176.3-201ENST00000602456 418 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC133552.5-201ENST00000604266 540 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 MKI67P1-201ENST00000604297 1460 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC112220.3-201ENST00000605502 502 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AL031775.1-201ENST00000607014 887 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 AC005962.2-201ENST00000611427 652 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 MIR6885-201ENST00000612241 66 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
GFRA1P56159 WT1-AS_8.1-201ENST00000615200 275 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 HTR1DP1-201ENST00000616500 888 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC116165.2-201ENST00000616705 206 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC073968.1-201ENST00000618594 637 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 RNU6-368P-201ENST00000620928 107 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC211486.4-201ENST00000621495 113 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 AC025287.2-201ENST00000621911 668 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 RNU6-538P-201ENST00000622329 107 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 AC027559.1-201ENST00000636288 271 ntBASIC6.12□□□□□ -1.43
GFRA1P56159 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms