Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH4P55283 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
CDH4P55283 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDH4P55283 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH4P55283 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH4P55283 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH4P55283 PPIAP9-201ENST00000403866 498 ntBASIC5.54□□□□□ -1.52
CDH4P55283 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH4P55283 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH4P55283 SLC35E1P1-201ENST00000419313 864 ntBASIC5.54□□□□□ -1.52
CDH4P55283 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 FAM96AP1-201ENST00000430879 482 ntBASIC5.54□□□□□ -1.52
CDH4P55283 AC099670.2-201ENST00000435130 321 ntBASIC5.54□□□□□ -1.52
CDH4P55283 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH4P55283 AL606490.1-201ENST00000452266 765 ntBASIC5.54□□□□□ -1.52
CDH4P55283 RN7SL197P-201ENST00000466981 299 ntBASIC5.54□□□□□ -1.52
CDH4P55283 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH4P55283 AC024558.1-201ENST00000505008 528 ntBASIC5.54□□□□□ -1.52
CDH4P55283 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH4P55283 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH4P55283 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH4P55283 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH4P55283 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH4P55283 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH4P55283 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH4P55283 AC008115.4-201ENST00000619780 775 ntBASIC5.54□□□□□ -1.52
CDH4P55283 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH4P55283 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH4P55283 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH4P55283 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH4P55283 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH4P55283 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH4P55283 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH4P55283 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH4P55283 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CDH4P55283 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 AC005294.1-201ENST00000355509 281 ntBASIC5.53□□□□□ -1.52
CDH4P55283 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDH4P55283 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CDH4P55283 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH4P55283 AP000534.2-201ENST00000412729 568 ntBASIC5.53□□□□□ -1.52
CDH4P55283 RPL35AP24-201ENST00000413846 330 ntBASIC5.53□□□□□ -1.52
CDH4P55283 GTF3AP1-201ENST00000416942 1004 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AL359265.1-201ENST00000440296 795 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AL035090.1-201ENST00000454835 332 ntBASIC5.53□□□□□ -1.52
CDH4P55283 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 RPS21P4-201ENST00000487122 248 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH4P55283 PGAM1P13-201ENST00000507497 754 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH4P55283 SCARNA20.4-201ENST00000516969 131 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH4P55283 OR8G3P-201ENST00000533406 921 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH4P55283 NPM1P5-201ENST00000557228 838 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 AL512329.2-201ENST00000607350 548 ntBASIC5.53□□□□□ -1.52
CDH4P55283 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AC004808.2-201ENST00000627965 773 ntBASIC5.53□□□□□ -1.52
CDH4P55283 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH4P55283 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH4P55283 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH4P55283 AP000473.2-201ENST00000602659 1537 ntBASIC5.53□□□□□ -1.52
CDH4P55283 CR788268.1-201ENST00000603931 1809 ntBASIC5.53□□□□□ -1.52
CDH4P55283 AC100757.1-201ENST00000616872 1835 ntBASIC5.53□□□□□ -1.52
CDH4P55283 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH4P55283 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH4P55283 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH4P55283 AL078621.3-201ENST00000623707 2042 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms