Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HAUS8P1-201ENST00000549005 542 ntBASIC5.43□□□□□ -1.54
PDX1P52945 AC126615.2-201ENST00000553003 515 ntBASIC5.43□□□□□ -1.54
PDX1P52945 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.43□□□□□ -1.54
PDX1P52945 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PDX1P52945 AC012616.1-201ENST00000600294 197 ntBASIC5.43□□□□□ -1.54
PDX1P52945 AL133481.2-203ENST00000607558 139 ntBASIC5.43□□□□□ -1.54
PDX1P52945 RPSAP73-201ENST00000614820 330 ntBASIC5.43□□□□□ -1.54
PDX1P52945 AL118522.2-201ENST00000616045 615 ntBASIC5.43□□□□□ -1.54
PDX1P52945 AC073592.7-201ENST00000623659 507 ntBASIC5.43□□□□□ -1.54
PDX1P52945 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.43□□□□□ -1.54
PDX1P52945 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.43□□□□□ -1.54
PDX1P52945 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.43□□□□□ -1.54
PDX1P52945 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.43□□□□□ -1.54
PDX1P52945 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.43□□□□□ -1.54
PDX1P52945 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDX1P52945 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 AC239868.2-201ENST00000564237 4527 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AL355834.1-201ENST00000556602 3965 ntBASIC5.42□□□□□ -1.54
PDX1P52945 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 OR51C1P-202ENST00000641159 1444 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AP004607.3-201ENST00000530354 3915 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 RNA5SP507-201ENST00000363603 121 ntBASIC5.42□□□□□ -1.54
PDX1P52945 RNU6-1331P-201ENST00000363658 106 ntBASIC5.42□□□□□ -1.54
PDX1P52945 MIR223-201ENST00000385204 110 ntBASIC5.42□□□□□ -1.54
PDX1P52945 RNU1-77P-201ENST00000390868 162 ntBASIC5.42□□□□□ -1.54
PDX1P52945 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 RPL23AP27-201ENST00000415161 451 ntBASIC5.42□□□□□ -1.54
PDX1P52945 SLC35E1P1-201ENST00000419313 864 ntBASIC5.42□□□□□ -1.54
PDX1P52945 CRIP1P1-201ENST00000427567 185 ntBASIC5.42□□□□□ -1.54
PDX1P52945 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.42□□□□□ -1.54
PDX1P52945 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.42□□□□□ -1.54
PDX1P52945 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.42□□□□□ -1.54
PDX1P52945 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 RPL7P45-201ENST00000455851 743 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 RN7SL51P-201ENST00000468230 285 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC016687.1-201ENST00000482574 353 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AC072052.1-201ENST00000496556 306 ntBASIC5.42□□□□□ -1.54
PDX1P52945 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.42□□□□□ -1.54
PDX1P52945 SNORA70.17-201ENST00000516449 133 ntBASIC5.42□□□□□ -1.54
PDX1P52945 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.42□□□□□ -1.54
PDX1P52945 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 AL121594.2-201ENST00000541658 472 ntBASIC5.42□□□□□ -1.54
PDX1P52945 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 AC004825.1-201ENST00000555068 586 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AP001357.1-201ENST00000586304 1053 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC060780.2-201ENST00000589047 198 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AL513327.3-201ENST00000602618 469 ntBASIC5.42□□□□□ -1.54
PDX1P52945 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.42□□□□□ -1.54
PDX1P52945 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.42□□□□□ -1.54
PDX1P52945 AL136295.6-201ENST00000610486 658 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC008833.1-201ENST00000611633 691 ntBASIC5.42□□□□□ -1.54
PDX1P52945 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.42□□□□□ -1.54
PDX1P52945 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.42□□□□□ -1.54
PDX1P52945 AC120036.2-201ENST00000509729 1474 ntBASIC5.42□□□□□ -1.54
PDX1P52945 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PDX1P52945 MFSD8-239ENST00000641590 2479 ntBASIC5.42□□□□□ -1.54
PDX1P52945 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDX1P52945 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDX1P52945 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.42□□□□□ -1.54
PDX1P52945 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.41□□□□□ -1.54
PDX1P52945 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 AC138907.8-201ENST00000623981 2256 ntBASIC5.41□□□□□ -1.54
PDX1P52945 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
PDX1P52945 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PDX1P52945 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PDX1P52945 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.41□□□□□ -1.54
PDX1P52945 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDX1P52945 U3.2-201ENST00000362981 210 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms