Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.01□□□□□ -1.45
CLCN3P51790 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLCN3P51790 AC126915.2-201ENST00000610957 190 ntBASIC6.01□□□□□ -1.45
CLCN3P51790 AL356752.1-201ENST00000615844 593 ntBASIC6.01□□□□□ -1.45
CLCN3P51790 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLCN3P51790 AL590410.1-201ENST00000617925 333 ntBASIC6.01□□□□□ -1.45
CLCN3P51790 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.01□□□□□ -1.45
CLCN3P51790 CYP4F35P-202ENST00000636121 390 ntBASIC6.01□□□□□ -1.45
CLCN3P51790 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLCN3P51790 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLCN3P51790 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.01□□□□□ -1.45
CLCN3P51790 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CLCN3P51790 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLCN3P51790 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLCN3P51790 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLCN3P51790 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLCN3P51790 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 KYNUP3-201ENST00000574386 1341 ntBASIC6□□□□□ -1.45
CLCN3P51790 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6□□□□□ -1.45
CLCN3P51790 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLCN3P51790 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
CLCN3P51790 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLCN3P51790 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 RNA5SP514-201ENST00000363717 111 ntBASIC6□□□□□ -1.45
CLCN3P51790 SNORA70-201ENST00000384436 135 ntBASIC6□□□□□ -1.45
CLCN3P51790 MIR7-1-201ENST00000384871 110 ntBASIC6□□□□□ -1.45
CLCN3P51790 RNU1-149P-201ENST00000390870 161 ntBASIC6□□□□□ -1.45
CLCN3P51790 RPL7P58-201ENST00000402913 758 ntBASIC6□□□□□ -1.45
CLCN3P51790 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CLCN3P51790 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6□□□□□ -1.45
CLCN3P51790 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6□□□□□ -1.45
CLCN3P51790 MRPS21P3-201ENST00000436696 262 ntBASIC6□□□□□ -1.45
CLCN3P51790 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6□□□□□ -1.45
CLCN3P51790 AL672138.1-201ENST00000450604 1015 ntBASIC6□□□□□ -1.45
CLCN3P51790 TPRKBP1-201ENST00000456243 481 ntBASIC6□□□□□ -1.45
CLCN3P51790 AC008410.1-201ENST00000483777 339 ntBASIC6□□□□□ -1.45
CLCN3P51790 RPL32P9-201ENST00000487963 407 ntBASIC6□□□□□ -1.45
CLCN3P51790 ATG10-AS1-201ENST00000504846 648 ntBASIC6□□□□□ -1.45
CLCN3P51790 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6□□□□□ -1.45
CLCN3P51790 BMPR1APS2-201ENST00000527904 1012 ntBASIC6□□□□□ -1.45
CLCN3P51790 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6□□□□□ -1.45
CLCN3P51790 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLCN3P51790 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6□□□□□ -1.45
CLCN3P51790 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6□□□□□ -1.45
CLCN3P51790 KATNBL1P1-201ENST00000605192 748 ntBASIC6□□□□□ -1.45
CLCN3P51790 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6□□□□□ -1.45
CLCN3P51790 AL139254.3-201ENST00000641097 674 ntBASIC6□□□□□ -1.45
CLCN3P51790 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CLCN3P51790 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CLCN3P51790 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLCN3P51790 AC022417.1-201ENST00000624768 1303 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CLCN3P51790 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.99□□□□□ -1.45
CLCN3P51790 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN3P51790 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.99□□□□□ -1.45
CLCN3P51790 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLCN3P51790 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CLCN3P51790 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN3P51790 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN3P51790 MRRFP1-201ENST00000435941 1675 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 RPL23P2-201ENST00000320371 421 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 SNORA67-201ENST00000384423 137 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AL607077.1-201ENST00000401718 499 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AC007064.3-201ENST00000422608 359 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AL590399.2-201ENST00000427536 309 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 MTCO1P57-201ENST00000432182 261 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 MAPRE1P3-201ENST00000435438 796 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.99□□□□□ -1.45
CLCN3P51790 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.99□□□□□ -1.45
CLCN3P51790 IGBP1P3-201ENST00000447449 1000 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AC093270.2-201ENST00000486157 792 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 RN7SL808P-201ENST00000496066 299 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AC109464.1-201ENST00000511091 819 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.99□□□□□ -1.45
CLCN3P51790 MTND2P17-201ENST00000550281 688 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.99□□□□□ -1.45
CLCN3P51790 NPM1P5-201ENST00000557228 838 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLCN3P51790 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.99□□□□□ -1.45
CLCN3P51790 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.99□□□□□ -1.45
CLCN3P51790 AP001267.4-201ENST00000602598 545 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AC018690.1-201ENST00000608144 626 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.99□□□□□ -1.45
CLCN3P51790 OR7M1P-201ENST00000608946 533 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.99□□□□□ -1.45
CLCN3P51790 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.99□□□□□ -1.45
CLCN3P51790 WBP1LP8-201ENST00000617401 327 ntBASIC5.99□□□□□ -1.45
CLCN3P51790 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
CLCN3P51790 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLCN3P51790 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.99□□□□□ -1.45
CLCN3P51790 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.99□□□□□ -1.45
CLCN3P51790 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms