Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 Z99289.3-201ENST00000605586 594 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AL355802.4-201ENST00000607635 548 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AC084036.1-201ENST00000609190 508 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AL355974.3-201ENST00000617383 467 ntBASIC6.94□□□□□ -1.3
MRE11P49959 MIR7159-201ENST00000620587 66 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AL078595.3-201ENST00000623815 1166 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AC061999.1-201ENST00000624454 177 ntBASIC6.94□□□□□ -1.3
MRE11P49959 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
MRE11P49959 AC012078.1-201ENST00000405035 1646 ntBASIC6.94□□□□□ -1.3
MRE11P49959 MTND5P31-201ENST00000419366 1374 ntBASIC6.94□□□□□ -1.3
MRE11P49959 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AC110792.3-201ENST00000595906 1614 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.94□□□□□ -1.3
MRE11P49959 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
MRE11P49959 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 OR9K1P-202ENST00000641111 3217 ntBASIC6.93□□□□□ -1.3
MRE11P49959 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
MRE11P49959 SNORD16-201ENST00000362803 99 ntBASIC6.93□□□□□ -1.3
MRE11P49959 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.93□□□□□ -1.3
MRE11P49959 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 Z83846.1-201ENST00000446798 265 ntBASIC6.93□□□□□ -1.3
MRE11P49959 RPS23P9-201ENST00000448848 438 ntBASIC6.93□□□□□ -1.3
MRE11P49959 C1DP3-201ENST00000455013 423 ntBASIC6.93□□□□□ -1.3
MRE11P49959 MTND2P6-201ENST00000455337 1030 ntBASIC6.93□□□□□ -1.3
MRE11P49959 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 OR7E157P-201ENST00000494376 911 ntBASIC6.93□□□□□ -1.3
MRE11P49959 AC231760.1-201ENST00000498002 260 ntBASIC6.93□□□□□ -1.3
MRE11P49959 RBBP4P1-201ENST00000502424 1276 ntBASIC6.93□□□□□ -1.3
MRE11P49959 OR7E99P-201ENST00000505750 922 ntBASIC6.93□□□□□ -1.3
MRE11P49959 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 ATP5LP3-201ENST00000514223 304 ntBASIC6.93□□□□□ -1.3
MRE11P49959 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
MRE11P49959 AC135983.3-201ENST00000528049 1226 ntBASIC6.93□□□□□ -1.3
MRE11P49959 SETP17-201ENST00000534163 817 ntBASIC6.93□□□□□ -1.3
MRE11P49959 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 CYCSP38-201ENST00000559840 322 ntBASIC6.93□□□□□ -1.3
MRE11P49959 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 AC010487.1-201ENST00000594408 1172 ntBASIC6.93□□□□□ -1.3
MRE11P49959 AC093424.1-201ENST00000604999 338 ntBASIC6.93□□□□□ -1.3
MRE11P49959 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.93□□□□□ -1.3
MRE11P49959 AC138965.3-201ENST00000623875 498 ntBASIC6.93□□□□□ -1.3
MRE11P49959 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.93□□□□□ -1.3
MRE11P49959 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.93□□□□□ -1.3
MRE11P49959 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.93□□□□□ -1.3
MRE11P49959 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.93□□□□□ -1.3
MRE11P49959 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MRE11P49959 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.93□□□□□ -1.3
MRE11P49959 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 AL353743.3-201ENST00000442109 1468 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
MRE11P49959 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 RPL12P23-201ENST00000405880 490 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms