Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA1P49639 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXA1P49639 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 AC124891.1-201ENST00000536322 519 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC244502.2-201ENST00000543361 851 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AL591167.1-201ENST00000607321 456 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC112503.2-201ENST00000609005 552 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC090912.3-201ENST00000609775 533 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 uc_338.26-201ENST00000612659 160 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC005156.1-201ENST00000613371 573 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 MIR8084-201ENST00000614105 89 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 RMST_5.1-201ENST00000618704 126 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC004808.1-201ENST00000627671 721 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 AC017002.4-201ENST00000604721 1525 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 CASC19-246ENST00000641625 1606 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC000374.1-201ENST00000434698 1745 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXA1P49639 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXA1P49639 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXA1P49639 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA1P49639 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXA1P49639 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HOXA1P49639 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HOXA1P49639 AL133243.2-201ENST00000610331 1621 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 RPL11P4-201ENST00000332269 436 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 RN7SKP128-201ENST00000364270 303 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA1P49639 RNU6-1000P-201ENST00000391066 106 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AC007068.1-201ENST00000396690 844 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AL359643.1-201ENST00000404109 423 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 RNA5SP156-201ENST00000410250 110 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 UBTFL2-201ENST00000411859 1191 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 CBX1P3-201ENST00000413296 527 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 CDY17P-201ENST00000414121 1282 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.84□□□□□ -1.63
HOXA1P49639 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA1P49639 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA1P49639 AL358176.3-201ENST00000420757 454 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA1P49639 GLUD1P9-201ENST00000420997 1173 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA1P49639 AC012519.1-201ENST00000424588 610 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 CDY8P-201ENST00000428380 1279 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 RNFT1P2-201ENST00000443064 757 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 CDY20P-201ENST00000447528 1279 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 RPL7L1P1-201ENST00000448259 785 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA1P49639 RPL31P11-202ENST00000454082 372 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 RPS3AP53-201ENST00000454716 778 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA1P49639 CTSLP6-201ENST00000458273 1002 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 RN7SL393P-201ENST00000463588 296 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 RN7SL83P-201ENST00000468131 297 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AC015524.1-201ENST00000491585 472 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA1P49639 TOMM22P4-201ENST00000511318 336 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA1P49639 RNA5SP206-201ENST00000516703 121 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 OR56A7P-201ENST00000524865 941 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA1P49639 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA1P49639 AC084824.2-201ENST00000548906 345 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AL121839.1-201ENST00000556233 1185 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HOXA1P49639 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA1P49639 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA1P49639 MTND1P8-201ENST00000571424 950 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AC025283.1-201ENST00000572039 734 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA1P49639 RN7SL32P-201ENST00000580514 281 ntBASIC4.84□□□□□ -1.63
HOXA1P49639 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms