Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR421-201ENST00000365696 85 ntBASIC5.8□□□□□ -1.48
HADHAP40939 RN7SKP29-201ENST00000410957 272 ntBASIC5.8□□□□□ -1.48
HADHAP40939 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AL354890.1-201ENST00000413730 346 ntBASIC5.8□□□□□ -1.48
HADHAP40939 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 RPL5P2-201ENST00000429598 854 ntBASIC5.8□□□□□ -1.48
HADHAP40939 NDUFS5P5-201ENST00000437256 321 ntBASIC5.8□□□□□ -1.48
HADHAP40939 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.8□□□□□ -1.48
HADHAP40939 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 AC004129.2-201ENST00000457229 287 ntBASIC5.8□□□□□ -1.48
HADHAP40939 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 AC067904.2-201ENST00000517322 1283 ntBASIC5.8□□□□□ -1.48
HADHAP40939 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AC122134.1-201ENST00000565664 1104 ntBASIC5.8□□□□□ -1.48
HADHAP40939 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.8□□□□□ -1.48
HADHAP40939 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.8□□□□□ -1.48
HADHAP40939 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.8□□□□□ -1.48
HADHAP40939 COX6CP7-201ENST00000597056 208 ntBASIC5.8□□□□□ -1.48
HADHAP40939 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AC005021.1-201ENST00000608730 355 ntBASIC5.8□□□□□ -1.48
HADHAP40939 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.8□□□□□ -1.48
HADHAP40939 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.8□□□□□ -1.48
HADHAP40939 AC129915.3-201ENST00000634128 948 ntBASIC5.8□□□□□ -1.48
HADHAP40939 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HADHAP40939 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.8□□□□□ -1.48
HADHAP40939 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 AC027228.2-201ENST00000567141 2154 ntBASIC5.8□□□□□ -1.48
HADHAP40939 AC010266.2-201ENST00000564741 3255 ntBASIC5.8□□□□□ -1.48
HADHAP40939 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HADHAP40939 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 AC011933.2-201ENST00000578539 2790 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC093775.1-201ENST00000624154 1868 ntBASIC5.79□□□□□ -1.48
HADHAP40939 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HADHAP40939 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HADHAP40939 HMGB3P7-201ENST00000400214 611 ntBASIC5.79□□□□□ -1.48
HADHAP40939 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 MIR1203-201ENST00000408812 85 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 RNF10P1-201ENST00000418589 369 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HADHAP40939 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 OR7E116P-201ENST00000448529 957 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC090602.1-201ENST00000469695 252 ntBASIC5.79□□□□□ -1.48
HADHAP40939 RPL7P51-201ENST00000490532 749 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC090543.1-201ENST00000492168 485 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 RNU6-889P-201ENST00000517189 103 ntBASIC5.79□□□□□ -1.48
HADHAP40939 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.79□□□□□ -1.48
HADHAP40939 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.79□□□□□ -1.48
HADHAP40939 AC019131.2-201ENST00000609071 870 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 AC026124.2-201ENST00000621847 656 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AP003499.2-201ENST00000624100 483 ntBASIC5.79□□□□□ -1.48
HADHAP40939 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.79□□□□□ -1.48
HADHAP40939 AC092159.4-201ENST00000624944 550 ntBASIC5.79□□□□□ -1.48
HADHAP40939 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 AC008691.1-209ENST00000642094 814 ntBASIC5.79□□□□□ -1.48
HADHAP40939 MFSD8-219ENST00000641228 2559 ntBASIC5.79□□□□□ -1.48
HADHAP40939 AC132825.1-201ENST00000463573 2247 ntBASIC5.79□□□□□ -1.48
HADHAP40939 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HADHAP40939 MTND4P21-201ENST00000453886 1357 ntBASIC5.79□□□□□ -1.48
HADHAP40939 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HADHAP40939 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HADHAP40939 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HADHAP40939 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
HADHAP40939 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HADHAP40939 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
HADHAP40939 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms