Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGCLP35914 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGCLP35914 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGCLP35914 AC006363.1-201ENST00000603806 463 ntBASIC5.4□□□□□ -1.54
HMGCLP35914 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCLP35914 AC010632.3-201ENST00000611377 369 ntBASIC5.4□□□□□ -1.54
HMGCLP35914 AC109583.2-201ENST00000617367 129 ntBASIC5.4□□□□□ -1.54
HMGCLP35914 AC138965.3-201ENST00000623875 498 ntBASIC5.4□□□□□ -1.54
HMGCLP35914 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGCLP35914 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HMGCLP35914 SAMMSON-209ENST00000641222 1100 ntBASIC5.4□□□□□ -1.54
HMGCLP35914 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCLP35914 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HMGCLP35914 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCLP35914 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCLP35914 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCLP35914 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGCLP35914 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGCLP35914 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HMGCLP35914 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCLP35914 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCLP35914 AC026523.2-201ENST00000625039 7739 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMGCLP35914 RN7SKP160-201ENST00000363804 340 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 SNORA70.6-201ENST00000383934 134 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HMGCLP35914 U3.25-201ENST00000391209 220 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AC009804.1-201ENST00000400949 179 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AL133388.1-201ENST00000404509 287 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AL035696.2-201ENST00000407941 709 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 RNA5SP487-201ENST00000410186 122 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCLP35914 AL121878.1-201ENST00000418638 859 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 GNG5P5-201ENST00000420444 220 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 DSTNP5-201ENST00000427921 523 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCLP35914 MED28P3-201ENST00000444288 531 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AC007386.1-201ENST00000455212 582 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCLP35914 AC138832.1-201ENST00000522871 556 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCLP35914 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCLP35914 OR8G3P-201ENST00000533406 921 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AP004607.2-201ENST00000533949 322 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCLP35914 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCLP35914 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.39□□□□□ -1.55
HMGCLP35914 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCLP35914 MIR6768-201ENST00000610734 72 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AC079395.2-201ENST00000610982 737 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AC244107.2-201ENST00000611773 76 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AL359513.1-201ENST00000614364 557 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 AP003400.3-201ENST00000624904 346 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCLP35914 AC003973.3-201ENST00000624863 2822 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCLP35914 Z83820.1-201ENST00000456978 1499 ntBASIC5.39□□□□□ -1.55
HMGCLP35914 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 AL353796.1-201ENST00000561542 3241 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
HMGCLP35914 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCLP35914 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 AL390774.1-201ENST00000411924 246 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCLP35914 AL691447.1-201ENST00000419456 387 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCLP35914 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 AC017019.1-201ENST00000426129 261 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGCLP35914 AC016772.1-201ENST00000444170 1261 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCLP35914 AC091544.1-201ENST00000484702 348 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCLP35914 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGCLP35914 BX510359.5-201ENST00000515651 304 ntBASIC5.38□□□□□ -1.55
HMGCLP35914 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGCLP35914 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCLP35914 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCLP35914 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCLP35914 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms