Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC13P31276 AC005042.1-201ENST00000393397 800 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC13P31276 NENFP1-201ENST00000419476 466 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AC093084.1-201ENST00000424233 687 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 MRPS21P2-201ENST00000424704 264 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AL590762.4-201ENST00000425885 253 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC13P31276 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC13P31276 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC13P31276 NPM1P39-201ENST00000449818 867 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC13P31276 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC13P31276 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC13P31276 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC13P31276 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC13P31276 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC13P31276 AC060780.2-201ENST00000589047 198 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC13P31276 HIRAP1-201ENST00000605318 787 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 MIR7155-201ENST00000615925 56 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AC090510.2-201ENST00000617465 629 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC13P31276 AC105105.5-201ENST00000622635 1294 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AC136428.4-201ENST00000634254 1155 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC13P31276 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC13P31276 AP004607.3-201ENST00000530354 3915 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 KYNUP3-201ENST00000574386 1341 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AL731532.1-201ENST00000623972 4236 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC13P31276 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
HOXC13P31276 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HOXC13P31276 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC13P31276 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC13P31276 AC007342.9-201ENST00000623877 1385 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 AC093671.1-201ENST00000624981 2929 ntBASIC5.92□□□□□ -1.46
HOXC13P31276 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HOXC13P31276 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC13P31276 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 AC103591.2-201ENST00000265259 766 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC13P31276 RNA5SP234-201ENST00000363916 119 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 RNU4-7P-201ENST00000364758 141 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 RNA5SP30-201ENST00000365552 115 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC13P31276 RPL11P3-201ENST00000395256 523 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AL136131.1-201ENST00000406079 803 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC13P31276 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC13P31276 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 RFESDP1-201ENST00000422350 461 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AL590399.2-201ENST00000427536 309 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC13P31276 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 AL392003.1-201ENST00000434394 243 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC13P31276 SPRYD7P1-201ENST00000443861 570 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AC022215.1-201ENST00000481770 362 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 RPL32P33-201ENST00000487023 394 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 SCARNA6.1-201ENST00000516989 238 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 OR10G5P-201ENST00000532733 358 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AL049872.1-201ENST00000556323 322 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 FAM106CP-201ENST00000582212 507 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AC063977.5-201ENST00000601044 974 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 AC015922.4-201ENST00000612568 690 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC13P31276 AP003499.2-201ENST00000624100 483 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 SOCS5P3-201ENST00000425115 1576 ntBASIC5.91□□□□□ -1.46
HOXC13P31276 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC13P31276 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC13P31276 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
HOXC13P31276 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC13P31276 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC13P31276 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.9□□□□□ -1.46
HOXC13P31276 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC13P31276 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC13P31276 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
HOXC13P31276 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HOXC13P31276 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms