Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC096775.1-201ENST00000437724 448 ntBASIC5.54□□□□□ -1.52
CDH3P22223 XKRYP6-201ENST00000440468 1116 ntBASIC5.54□□□□□ -1.52
CDH3P22223 XKRYP3-201ENST00000442113 1116 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC092106.1-201ENST00000444291 373 ntBASIC5.54□□□□□ -1.52
CDH3P22223 EEF1B2P6-201ENST00000445713 673 ntBASIC5.54□□□□□ -1.52
CDH3P22223 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH3P22223 OR7E116P-201ENST00000448529 957 ntBASIC5.54□□□□□ -1.52
CDH3P22223 FRG2FP-204ENST00000453982 852 ntBASIC5.54□□□□□ -1.52
CDH3P22223 RPSAP39-201ENST00000467439 883 ntBASIC5.54□□□□□ -1.52
CDH3P22223 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH3P22223 AC006539.1-201ENST00000481419 501 ntBASIC5.54□□□□□ -1.52
CDH3P22223 OR9N1P-201ENST00000491296 333 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC009120.1-201ENST00000493458 473 ntBASIC5.54□□□□□ -1.52
CDH3P22223 EIF3LP3-201ENST00000495197 822 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC023424.1-201ENST00000496058 459 ntBASIC5.54□□□□□ -1.52
CDH3P22223 RPSAP51-201ENST00000497462 645 ntBASIC5.54□□□□□ -1.52
CDH3P22223 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH3P22223 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH3P22223 AC074255.1-201ENST00000511259 501 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC139365.2-201ENST00000517972 253 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH3P22223 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH3P22223 AC011270.1-201ENST00000558606 583 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH3P22223 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH3P22223 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH3P22223 MIR4505-201ENST00000582238 73 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC245128.3-201ENST00000594721 748 ntBASIC5.54□□□□□ -1.52
CDH3P22223 RNA5SP440-201ENST00000612665 119 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AC004477.3-201ENST00000614061 590 ntBASIC5.54□□□□□ -1.52
CDH3P22223 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.54□□□□□ -1.52
CDH3P22223 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDH3P22223 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH3P22223 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH3P22223 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH3P22223 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH3P22223 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH3P22223 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH3P22223 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH3P22223 AL513325.1-201ENST00000417716 1034 ntBASIC5.53□□□□□ -1.52
CDH3P22223 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 Z84478.1-201ENST00000438230 1219 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC023271.1-201ENST00000445936 1090 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC004129.2-201ENST00000457229 287 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC023141.9-201ENST00000458734 412 ntBASIC5.53□□□□□ -1.52
CDH3P22223 TRBV8-1-201ENST00000481590 279 ntBASIC5.53□□□□□ -1.52
CDH3P22223 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH3P22223 AC105384.2-201ENST00000508433 640 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC025423.2-201ENST00000537570 439 ntBASIC5.53□□□□□ -1.52
CDH3P22223 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 AL049872.1-201ENST00000556323 322 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH3P22223 AC096996.1-201ENST00000563813 325 ntBASIC5.53□□□□□ -1.52
CDH3P22223 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH3P22223 AC020978.7-201ENST00000575953 1187 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 AC239803.2-201ENST00000610161 430 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC096586.2-201ENST00000610260 441 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC090607.5-201ENST00000615692 224 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AL691477.1-201ENST00000624398 162 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC005618.4-201ENST00000625053 554 ntBASIC5.53□□□□□ -1.52
CDH3P22223 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CDH3P22223 AL049767.1-202ENST00000637826 242 ntBASIC5.53□□□□□ -1.52
CDH3P22223 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH3P22223 GVINP1-202ENST00000531871 7271 ntBASIC5.53□□□□□ -1.52
CDH3P22223 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH3P22223 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH3P22223 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 AC005224.3-201ENST00000584683 2140 ntBASIC5.53□□□□□ -1.52
CDH3P22223 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH3P22223 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDH3P22223 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH3P22223 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDH3P22223 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH3P22223 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH3P22223 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.52□□□□□ -1.53
CDH3P22223 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH3P22223 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH3P22223 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CDH3P22223 AL159987.1-201ENST00000347911 293 ntBASIC5.52□□□□□ -1.53
CDH3P22223 DHFRP5-201ENST00000406944 564 ntBASIC5.52□□□□□ -1.53
CDH3P22223 RN7SKP293-201ENST00000411389 296 ntBASIC5.52□□□□□ -1.53
CDH3P22223 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms