Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL355834.1-201ENST00000556602 3965 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC092681.1-201ENST00000297369 291 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 RNU6-891P-201ENST00000384280 111 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 BMS1P17-202ENST00000416720 316 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AL662874.1-201ENST00000426065 230 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 BX276092.6-201ENST00000430476 250 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 BX276092.8-201ENST00000455722 250 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC109481.1-201ENST00000509173 282 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 NRBF2P4-201ENST00000520874 850 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC109635.6-201ENST00000525487 1113 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 PPATP2-201ENST00000605635 508 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 YES1P1-201ENST00000418510 1628 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 KARSP1-201ENST00000451871 1752 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DPA1P20036 AC068870.1-201ENST00000563737 2455 ntBASIC5.62□□□□□ -1.51
HLA-DPA1P20036 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 RNA5SP453-201ENST00000362503 119 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 RN7SKP69-201ENST00000365390 305 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 RN7SKP286-201ENST00000410894 299 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 SDHDP6-201ENST00000414693 480 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC007161.1-204ENST00000423039 460 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 MTND4LP13-201ENST00000425022 298 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 RN7SL197P-201ENST00000466981 299 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC114786.1-201ENST00000512892 1415 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL049872.1-201ENST00000556323 322 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC027281.1-201ENST00000574178 758 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 LINC02019-201ENST00000608605 2060 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL139124.1-201ENST00000609123 421 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL031658.2-201ENST00000616850 651 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC007683.2-201ENST00000624681 714 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DPA1P20036 AC097461.1-201ENST00000568928 2821 ntBASIC5.61□□□□□ -1.51
HLA-DPA1P20036 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 HSPA8P17-201ENST00000427029 1382 ntBASIC5.6□□□□□ -1.51
HLA-DPA1P20036 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DPA1P20036 AL133173.1-201ENST00000423458 397 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms