Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.44□□□□□ -1.54
XRCC1P18887 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
XRCC1P18887 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.44□□□□□ -1.54
XRCC1P18887 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 CR788268.1-201ENST00000603931 1809 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.43□□□□□ -1.54
XRCC1P18887 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
XRCC1P18887 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
XRCC1P18887 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.43□□□□□ -1.54
XRCC1P18887 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
XRCC1P18887 U3.7-201ENST00000363668 216 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.43□□□□□ -1.54
XRCC1P18887 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
XRCC1P18887 AC005522.1-201ENST00000395416 346 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 Z93019.1-201ENST00000416450 973 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 OR6D1P-201ENST00000436165 939 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.43□□□□□ -1.54
XRCC1P18887 RANP1-206ENST00000455094 651 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 AC007386.1-201ENST00000455212 582 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 RPS26P39-201ENST00000469206 341 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 RN7SL214P-201ENST00000487317 265 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 RN7SL547P-201ENST00000490793 290 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 MORF4L2P1-201ENST00000503761 858 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 AC112184.1-201ENST00000505179 312 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 GOLGA5P1-201ENST00000507317 980 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.43□□□□□ -1.54
XRCC1P18887 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.43□□□□□ -1.54
XRCC1P18887 PMS2P3-207ENST00000529061 717 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.43□□□□□ -1.54
XRCC1P18887 MIR4489-201ENST00000578869 62 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.43□□□□□ -1.54
XRCC1P18887 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.43□□□□□ -1.54
XRCC1P18887 AC010487.1-201ENST00000594408 1172 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.43□□□□□ -1.54
XRCC1P18887 AL359513.1-201ENST00000614364 557 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 MIR6826-201ENST00000617808 98 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 AC026367.3-201ENST00000619032 590 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 FRG1EP-201ENST00000634469 770 ntBASIC5.43□□□□□ -1.54
XRCC1P18887 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.43□□□□□ -1.54
XRCC1P18887 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
XRCC1P18887 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.43□□□□□ -1.54
XRCC1P18887 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
XRCC1P18887 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
XRCC1P18887 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 RARSP1-201ENST00000542842 1418 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
XRCC1P18887 AC009804.1-201ENST00000400949 179 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.42□□□□□ -1.54
XRCC1P18887 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 GTF3AP1-201ENST00000416942 1004 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.42□□□□□ -1.54
XRCC1P18887 TMEM183AP1-205ENST00000432739 290 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 NANOGP9-201ENST00000439890 892 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.42□□□□□ -1.54
XRCC1P18887 AC092106.1-201ENST00000444291 373 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 RN7SL51P-201ENST00000468230 285 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 RN7SL177P-201ENST00000476596 299 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 ATP5LP5-201ENST00000483050 299 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.42□□□□□ -1.54
XRCC1P18887 AC079064.1-201ENST00000528365 362 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.42□□□□□ -1.54
XRCC1P18887 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.42□□□□□ -1.54
XRCC1P18887 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.42□□□□□ -1.54
XRCC1P18887 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 SUGT1P3-202ENST00000604259 383 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.42□□□□□ -1.54
XRCC1P18887 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 AL118522.2-201ENST00000616045 615 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.42□□□□□ -1.54
XRCC1P18887 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.42□□□□□ -1.54
XRCC1P18887 AC006484.1-201ENST00000435086 1884 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 OR4F13P-202ENST00000560066 2054 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 AC073136.1-201ENST00000449426 2884 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 AC116158.1-201ENST00000560231 2129 ntBASIC5.42□□□□□ -1.54
XRCC1P18887 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
XRCC1P18887 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms