Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC012676.3-201ENST00000614983 479 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.09□□□□□ -1.75
CXCL1P09341 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.09□□□□□ -1.75
CXCL1P09341 NR1H5P-201ENST00000452683 1377 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.09□□□□□ -1.75
CXCL1P09341 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
CXCL1P09341 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.09□□□□□ -1.75
CXCL1P09341 MUC2-202ENST00000613187 4845 ntBASIC4.09□□□□□ -1.76
CXCL1P09341 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CXCL1P09341 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CXCL1P09341 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CXCL1P09341 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 AL159987.1-201ENST00000347911 293 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 RNU6-249P-201ENST00000363016 102 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 MIR431-201ENST00000385266 114 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 TRAV35-201ENST00000390462 330 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 NEPNP-201ENST00000404786 1371 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 RN7SKP146-201ENST00000410242 334 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 RNA5SP146-201ENST00000410743 123 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 BX284632.2-201ENST00000421091 399 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL1P09341 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL1P09341 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.08□□□□□ -1.76
CXCL1P09341 AL512605.1-202ENST00000441919 381 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.08□□□□□ -1.76
CXCL1P09341 RPL6P30-201ENST00000443382 862 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 RPL5P7-201ENST00000444235 813 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC092601.1-201ENST00000444526 383 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AL359955.2-201ENST00000445380 353 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 HMGB1P7-201ENST00000450921 612 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL1P09341 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.08□□□□□ -1.76
CXCL1P09341 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.08□□□□□ -1.76
CXCL1P09341 AC135999.1-201ENST00000478962 479 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 DEFB109F-201ENST00000491870 277 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 RPS27P20-201ENST00000492051 246 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC108751.5-201ENST00000492880 1336 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 DUTP7-201ENST00000507982 486 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC093325.1-201ENST00000508378 326 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC021678.3-201ENST00000517893 476 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL1P09341 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CXCL1P09341 AC022360.1-201ENST00000521058 340 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL1P09341 AP002373.2-201ENST00000541631 1060 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL1P09341 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.08□□□□□ -1.76
CXCL1P09341 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL1P09341 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 AC004801.6-201ENST00000616571 978 ntBASIC4.08□□□□□ -1.76
CXCL1P09341 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL1P09341 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL1P09341 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 CDC27P2-201ENST00000425026 1922 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 CASC19-238ENST00000641523 1558 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL1P09341 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CXCL1P09341 SNORA51.9-201ENST00000384295 124 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 MIR551B-201ENST00000384984 96 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 AC007161.1-204ENST00000423039 460 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 AC113412.1-201ENST00000425840 504 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 AL022331.1-201ENST00000429025 477 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 VN1R110P-201ENST00000438988 971 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL1P09341 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 RN7SL814P-201ENST00000487715 300 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL1P09341 RNA5SP249-201ENST00000516127 99 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 AC004232.2-201ENST00000574245 821 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CXCL1P09341 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.07□□□□□ -1.76
CXCL1P09341 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms