Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.08□□□□□ -1.44
MMP3P08254 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MMP3P08254 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.08□□□□□ -1.44
MMP3P08254 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.08□□□□□ -1.44
MMP3P08254 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.08□□□□□ -1.44
MMP3P08254 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.08□□□□□ -1.44
MMP3P08254 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.08□□□□□ -1.44
MMP3P08254 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MMP3P08254 HSPD1P7-201ENST00000447985 1686 ntBASIC6.07□□□□□ -1.44
MMP3P08254 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.07□□□□□ -1.44
MMP3P08254 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 AL607077.1-201ENST00000401718 499 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AL645733.1-201ENST00000402250 217 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AL589647.1-201ENST00000402485 466 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AL133270.1-201ENST00000402635 279 ntBASIC6.07□□□□□ -1.44
MMP3P08254 U3.36-201ENST00000408418 213 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.07□□□□□ -1.44
MMP3P08254 AC093655.2-201ENST00000425735 631 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.07□□□□□ -1.44
MMP3P08254 AL390879.2-203ENST00000426943 1121 ntBASIC6.07□□□□□ -1.44
MMP3P08254 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.07□□□□□ -1.44
MMP3P08254 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.07□□□□□ -1.44
MMP3P08254 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.07□□□□□ -1.44
MMP3P08254 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.07□□□□□ -1.44
MMP3P08254 RPL7P61-201ENST00000451721 751 ntBASIC6.07□□□□□ -1.44
MMP3P08254 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 PDCL3P4-201ENST00000489621 720 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.07□□□□□ -1.44
MMP3P08254 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AP001804.1-201ENST00000526868 919 ntBASIC6.07□□□□□ -1.44
MMP3P08254 OR5AM1P-201ENST00000532136 1032 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.07□□□□□ -1.44
MMP3P08254 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 AC133644.2-201ENST00000608142 540 ntBASIC6.07□□□□□ -1.44
MMP3P08254 Mico1.1-201ENST00000611698 204 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AC009163.6-201ENST00000612367 342 ntBASIC6.07□□□□□ -1.44
MMP3P08254 AL138960.2-201ENST00000625145 535 ntBASIC6.07□□□□□ -1.44
MMP3P08254 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
MMP3P08254 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MMP3P08254 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.06□□□□□ -1.44
MMP3P08254 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.06□□□□□ -1.44
MMP3P08254 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
MMP3P08254 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
MMP3P08254 RNA5SP305-201ENST00000362665 119 ntBASIC6.06□□□□□ -1.44
MMP3P08254 TRAV35-201ENST00000390462 330 ntBASIC6.06□□□□□ -1.44
MMP3P08254 MIR550A3-201ENST00000390735 95 ntBASIC6.06□□□□□ -1.44
MMP3P08254 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
MMP3P08254 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.06□□□□□ -1.44
MMP3P08254 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 SDR42E1P3-201ENST00000438345 502 ntBASIC6.06□□□□□ -1.44
MMP3P08254 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.06□□□□□ -1.44
MMP3P08254 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 GAPDHP25-201ENST00000447061 1001 ntBASIC6.06□□□□□ -1.44
MMP3P08254 AC073850.1-201ENST00000449243 255 ntBASIC6.06□□□□□ -1.44
MMP3P08254 AC093827.1-201ENST00000480094 861 ntBASIC6.06□□□□□ -1.44
MMP3P08254 AC109462.1-201ENST00000491087 368 ntBASIC6.06□□□□□ -1.44
MMP3P08254 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.06□□□□□ -1.44
MMP3P08254 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.06□□□□□ -1.44
MMP3P08254 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.06□□□□□ -1.44
MMP3P08254 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.06□□□□□ -1.44
MMP3P08254 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.06□□□□□ -1.44
MMP3P08254 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.06□□□□□ -1.44
MMP3P08254 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.06□□□□□ -1.44
MMP3P08254 AP004607.2-201ENST00000533949 322 ntBASIC6.06□□□□□ -1.44
MMP3P08254 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.06□□□□□ -1.44
MMP3P08254 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms