Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RETP07949 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.65□□□□□ -1.5
RETP07949 AL158827.1-201ENST00000416300 391 ntBASIC5.65□□□□□ -1.5
RETP07949 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.65□□□□□ -1.5
RETP07949 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.65□□□□□ -1.5
RETP07949 RPL5P2-201ENST00000429598 854 ntBASIC5.65□□□□□ -1.5
RETP07949 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.65□□□□□ -1.5
RETP07949 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.65□□□□□ -1.5
RETP07949 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.65□□□□□ -1.5
RETP07949 AP000547.1-201ENST00000454360 617 ntBASIC5.65□□□□□ -1.5
RETP07949 ACA64.4-201ENST00000459070 127 ntBASIC5.65□□□□□ -1.5
RETP07949 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.65□□□□□ -1.5
RETP07949 AL157777.1-201ENST00000468100 304 ntBASIC5.65□□□□□ -1.5
RETP07949 RN7SL447P-201ENST00000494711 245 ntBASIC5.65□□□□□ -1.5
RETP07949 SNRPCP2-201ENST00000504370 475 ntBASIC5.65□□□□□ -1.5
RETP07949 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.65□□□□□ -1.5
RETP07949 AC074255.1-201ENST00000511259 501 ntBASIC5.65□□□□□ -1.5
RETP07949 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.65□□□□□ -1.5
RETP07949 OR7E158P-201ENST00000524483 910 ntBASIC5.65□□□□□ -1.5
RETP07949 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.65□□□□□ -1.5
RETP07949 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.65□□□□□ -1.5
RETP07949 MIR4480-201ENST00000582492 71 ntBASIC5.65□□□□□ -1.5
RETP07949 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.65□□□□□ -1.5
RETP07949 AC006116.3-201ENST00000592968 361 ntBASIC5.65□□□□□ -1.5
RETP07949 AF230666.2-201ENST00000602328 725 ntBASIC5.65□□□□□ -1.5
RETP07949 OR51C1P-201ENST00000608504 942 ntBASIC5.65□□□□□ -1.5
RETP07949 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.65□□□□□ -1.5
RETP07949 AP002505.2-201ENST00000623585 696 ntBASIC5.65□□□□□ -1.5
RETP07949 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RETP07949 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RETP07949 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
RETP07949 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RETP07949 AC004656.1-201ENST00000568479 4951 ntBASIC5.65□□□□□ -1.51
RETP07949 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.65□□□□□ -1.51
RETP07949 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.64□□□□□ -1.51
RETP07949 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RETP07949 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.64□□□□□ -1.51
RETP07949 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RETP07949 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RETP07949 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RETP07949 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RETP07949 RNU1-106P-201ENST00000384382 164 ntBASIC5.64□□□□□ -1.51
RETP07949 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.64□□□□□ -1.51
RETP07949 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.64□□□□□ -1.51
RETP07949 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 TPT1P13-201ENST00000449760 499 ntBASIC5.64□□□□□ -1.51
RETP07949 DNAJB5P1-201ENST00000454004 806 ntBASIC5.64□□□□□ -1.51
RETP07949 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.64□□□□□ -1.51
RETP07949 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.64□□□□□ -1.51
RETP07949 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.64□□□□□ -1.51
RETP07949 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.64□□□□□ -1.51
RETP07949 RN7SKP99-201ENST00000517028 307 ntBASIC5.64□□□□□ -1.51
RETP07949 AC139365.2-201ENST00000517972 253 ntBASIC5.64□□□□□ -1.51
RETP07949 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.64□□□□□ -1.51
RETP07949 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.64□□□□□ -1.51
RETP07949 AC126615.2-201ENST00000553003 515 ntBASIC5.64□□□□□ -1.51
RETP07949 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.64□□□□□ -1.51
RETP07949 AC011840.5-201ENST00000582125 771 ntBASIC5.64□□□□□ -1.51
RETP07949 MIR4697-201ENST00000582977 78 ntBASIC5.64□□□□□ -1.51
RETP07949 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.64□□□□□ -1.51
RETP07949 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.64□□□□□ -1.51
RETP07949 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.64□□□□□ -1.51
RETP07949 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RETP07949 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RETP07949 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.64□□□□□ -1.51
RETP07949 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.64□□□□□ -1.51
RETP07949 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RETP07949 AC099654.3-201ENST00000447087 1546 ntBASIC5.64□□□□□ -1.51
RETP07949 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RETP07949 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.63□□□□□ -1.51
RETP07949 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RETP07949 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 AL603750.1-201ENST00000624216 1717 ntBASIC5.63□□□□□ -1.51
RETP07949 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RETP07949 AC114774.1-201ENST00000507410 1770 ntBASIC5.63□□□□□ -1.51
RETP07949 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RETP07949 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.63□□□□□ -1.51
RETP07949 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.63□□□□□ -1.51
RETP07949 AL049745.1-201ENST00000433953 286 ntBASIC5.63□□□□□ -1.51
RETP07949 PA2G4P6-201ENST00000438325 1197 ntBASIC5.63□□□□□ -1.51
RETP07949 AL663074.2-201ENST00000440621 479 ntBASIC5.63□□□□□ -1.51
RETP07949 AL389915.2-201ENST00000454576 441 ntBASIC5.63□□□□□ -1.51
RETP07949 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 AL672167.3-201ENST00000465951 960 ntBASIC5.63□□□□□ -1.51
RETP07949 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RETP07949 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms