Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC010435.1-201ENST00000623353 1177 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.36□□□□□ -1.39
COL1A1P02452 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.36□□□□□ -1.39
COL1A1P02452 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL1A1P02452 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.36□□□□□ -1.39
COL1A1P02452 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.36□□□□□ -1.39
COL1A1P02452 HSPA8P14-201ENST00000552265 1805 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL1A1P02452 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 AC007159.1-201ENST00000566529 4706 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 AL353625.1-202ENST00000366273 571 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 SNORA51.8-201ENST00000384234 132 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL1A1P02452 NUDT19P3-201ENST00000404698 555 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 RPS4XP9-201ENST00000405151 780 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 COX6B1P1-201ENST00000415962 213 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 USP9YP9-201ENST00000429406 715 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 MED28P3-201ENST00000444288 531 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 AC079168.1-201ENST00000458741 345 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.35□□□□□ -1.39
COL1A1P02452 AC009597.2-201ENST00000604659 592 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 MFSD8-216ENST00000641147 4009 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 AC012618.3-205ENST00000637896 1496 ntBASIC6.35□□□□□ -1.39
COL1A1P02452 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.35□□□□□ -1.39
COL1A1P02452 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.35□□□□□ -1.39
COL1A1P02452 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL1A1P02452 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
COL1A1P02452 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL1A1P02452 MIR192-201ENST00000384915 110 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 MIR1182-201ENST00000408363 97 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 RN7SKP17-201ENST00000411242 351 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 AL590139.1-201ENST00000416267 400 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 AC124944.2-201ENST00000429866 1242 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 RPL31P44-201ENST00000447680 377 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.34□□□□□ -1.39
COL1A1P02452 RN7SL814P-201ENST00000487715 300 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 IGBP1P4-201ENST00000503202 879 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.34□□□□□ -1.39
COL1A1P02452 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.34□□□□□ -1.39
COL1A1P02452 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL1A1P02452 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.34□□□□□ -1.39
COL1A1P02452 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.34□□□□□ -1.39
COL1A1P02452 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.34□□□□□ -1.39
COL1A1P02452 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.34□□□□□ -1.39
COL1A1P02452 AC005252.1-201ENST00000604518 1063 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 AC010632.3-201ENST00000611377 369 ntBASIC6.34□□□□□ -1.39
COL1A1P02452 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.34□□□□□ -1.39
COL1A1P02452 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.34□□□□□ -1.39
COL1A1P02452 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL1A1P02452 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL1A1P02452 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL1A1P02452 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL1A1P02452 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL1A1P02452 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL1A1P02452 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.34□□□□□ -1.39
COL1A1P02452 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
COL1A1P02452 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL1A1P02452 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL1A1P02452 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.34□□□□□ -1.4
COL1A1P02452 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL1A1P02452 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL1A1P02452 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
COL1A1P02452 RN7SKP149-201ENST00000363008 344 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 RNA5SP123-201ENST00000363244 119 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 RN7SKP145-201ENST00000363291 303 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
COL1A1P02452 AC016397.1-201ENST00000412463 242 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.34□□□□□ -1.4
COL1A1P02452 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.34□□□□□ -1.4
COL1A1P02452 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.34□□□□□ -1.4
COL1A1P02452 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.34□□□□□ -1.4
COL1A1P02452 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.34□□□□□ -1.4
COL1A1P02452 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.34□□□□□ -1.4
COL1A1P02452 AL138878.2-201ENST00000440581 1241 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
COL1A1P02452 HMGN1P9-201ENST00000515212 298 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 AC136777.2-201ENST00000522979 358 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 OR8Q1P-201ENST00000526467 655 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 AC079064.1-201ENST00000528365 362 ntBASIC6.34□□□□□ -1.4
COL1A1P02452 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.34□□□□□ -1.4
COL1A1P02452 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.34□□□□□ -1.4
COL1A1P02452 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.34□□□□□ -1.4
COL1A1P02452 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.34□□□□□ -1.4
COL1A1P02452 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL1A1P02452 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms