Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.37□□□□□ -1.55
SHOX2O60902 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.37□□□□□ -1.55
SHOX2O60902 AP001000.1-201ENST00000526843 742 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AC005363.1-201ENST00000530779 351 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AC027026.1-201ENST00000532323 742 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.37□□□□□ -1.55
SHOX2O60902 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.37□□□□□ -1.55
SHOX2O60902 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.37□□□□□ -1.55
SHOX2O60902 AL078601.3-201ENST00000573303 535 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 RN7SL52P-201ENST00000584271 284 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AL034374.2-201ENST00000605281 548 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 RN7SL787P-201ENST00000613000 284 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 RN7SL544P-201ENST00000617232 284 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 AP005431.1-201ENST00000618479 319 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 RN7SL763P-201ENST00000620922 284 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 MIR6806-201ENST00000622141 64 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 OR51C1P-202ENST00000641159 1444 ntBASIC5.37□□□□□ -1.55
SHOX2O60902 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHOX2O60902 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHOX2O60902 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.37□□□□□ -1.55
SHOX2O60902 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 AC005005.4-201ENST00000623789 16698 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 RN7SKP153-201ENST00000365026 316 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 NACAP7-201ENST00000407371 609 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 U3.32-201ENST00000408116 212 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 RNA5SP296-201ENST00000410523 111 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.36□□□□□ -1.55
SHOX2O60902 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.36□□□□□ -1.55
SHOX2O60902 NPM1P22-201ENST00000427761 952 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.36□□□□□ -1.55
SHOX2O60902 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 DNAJB5P1-201ENST00000454004 806 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AL356981.1-201ENST00000454879 684 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 RPL7P41-201ENST00000485823 957 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 RPL32P33-201ENST00000487023 394 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AC022133.1-201ENST00000490961 571 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 RPS27P20-201ENST00000492051 246 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.36□□□□□ -1.55
SHOX2O60902 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SHOX2O60902 RPL23AP53-201ENST00000521854 457 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.36□□□□□ -1.55
SHOX2O60902 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SHOX2O60902 AP005119.1-201ENST00000580956 292 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 MIR4260-201ENST00000583107 67 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AC108359.1-201ENST00000616451 1211 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 AC016542.2-201ENST00000624201 619 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 NEPNP-201ENST00000404786 1371 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 AL133268.1-201ENST00000405676 1401 ntBASIC5.36□□□□□ -1.55
SHOX2O60902 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SHOX2O60902 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.36□□□□□ -1.55
SHOX2O60902 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHOX2O60902 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHOX2O60902 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SHOX2O60902 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHOX2O60902 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
SHOX2O60902 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 AC023421.1-201ENST00000590535 1785 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.35□□□□□ -1.55
SHOX2O60902 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.35□□□□□ -1.55
SHOX2O60902 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.35□□□□□ -1.55
SHOX2O60902 IFIT1P1-201ENST00000400497 1449 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 AL354854.1-201ENST00000455940 1363 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.35□□□□□ -1.55
SHOX2O60902 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 RNU1-65P-201ENST00000363919 148 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 RN7SKP171-201ENST00000364417 303 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 AL354890.1-201ENST00000413730 346 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 TMBIM7P-201ENST00000418074 855 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.35□□□□□ -1.55
SHOX2O60902 AC104843.2-201ENST00000427666 297 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 FABP7P2-201ENST00000429946 379 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHOX2O60902 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.35□□□□□ -1.55
SHOX2O60902 AC020890.1-201ENST00000491837 504 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 RPS26P24-201ENST00000497656 331 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.35□□□□□ -1.55
SHOX2O60902 AC112484.3-201ENST00000505910 329 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.35□□□□□ -1.55
SHOX2O60902 AC108103.1-201ENST00000511286 446 ntBASIC5.35□□□□□ -1.55
SHOX2O60902 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.35□□□□□ -1.55
SHOX2O60902 AC021678.3-201ENST00000517893 476 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms