Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC024267.2-201ENST00000582737 417 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX3O60493 AC012368.3-201ENST00000604190 219 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC011891.2-201ENST00000604949 397 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX3O60493 AP005431.1-201ENST00000618479 319 ntBASIC5.29□□□□□ -1.56
SNX3O60493 AC004808.2-201ENST00000627965 773 ntBASIC5.29□□□□□ -1.56
SNX3O60493 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
SNX3O60493 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SNX3O60493 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SNX3O60493 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX3O60493 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX3O60493 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX3O60493 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SNX3O60493 PCAT14-202ENST00000627127 3935 ntBASIC5.29□□□□□ -1.56
SNX3O60493 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX3O60493 AC126323.6-202ENST00000568092 3511 ntBASIC5.28□□□□□ -1.56
SNX3O60493 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SNX3O60493 AC087565.3-202ENST00000642085 1603 ntBASIC5.28□□□□□ -1.56
SNX3O60493 OR56A4-201ENST00000330728 1209 ntBASIC5.28□□□□□ -1.56
SNX3O60493 MIR365B-201ENST00000362317 111 ntBASIC5.28□□□□□ -1.56
SNX3O60493 RN7SKP153-201ENST00000365026 316 ntBASIC5.28□□□□□ -1.56
SNX3O60493 RNU6-152P-201ENST00000384037 107 ntBASIC5.28□□□□□ -1.56
SNX3O60493 ZNF37CP-201ENST00000406795 241 ntBASIC5.28□□□□□ -1.56
SNX3O60493 RPS3AP2-201ENST00000407190 754 ntBASIC5.28□□□□□ -1.56
SNX3O60493 TRIM60P17-201ENST00000415181 719 ntBASIC5.28□□□□□ -1.56
SNX3O60493 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX3O60493 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 FAM183DP-201ENST00000421987 399 ntBASIC5.28□□□□□ -1.56
SNX3O60493 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX3O60493 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SNX3O60493 AL031584.1-201ENST00000447169 754 ntBASIC5.28□□□□□ -1.56
SNX3O60493 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX3O60493 AL035090.1-201ENST00000454835 332 ntBASIC5.28□□□□□ -1.56
SNX3O60493 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX3O60493 AC022336.1-201ENST00000475510 337 ntBASIC5.28□□□□□ -1.56
SNX3O60493 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 RPL7P41-201ENST00000485823 957 ntBASIC5.28□□□□□ -1.56
SNX3O60493 RN7SL447P-201ENST00000494711 245 ntBASIC5.28□□□□□ -1.56
SNX3O60493 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX3O60493 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SNX3O60493 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 RNA5SP464-201ENST00000516251 108 ntBASIC5.28□□□□□ -1.56
SNX3O60493 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX3O60493 AC105031.1-201ENST00000518550 476 ntBASIC5.28□□□□□ -1.56
SNX3O60493 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX3O60493 AL121839.1-201ENST00000556233 1185 ntBASIC5.28□□□□□ -1.56
SNX3O60493 AC092332.1-201ENST00000563684 829 ntBASIC5.28□□□□□ -1.56
SNX3O60493 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX3O60493 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX3O60493 AC016839.1-201ENST00000578162 867 ntBASIC5.28□□□□□ -1.56
SNX3O60493 AP005403.1-201ENST00000579720 229 ntBASIC5.28□□□□□ -1.56
SNX3O60493 AC233702.9-201ENST00000581528 203 ntBASIC5.28□□□□□ -1.56
SNX3O60493 AC067838.1-201ENST00000606064 577 ntBASIC5.28□□□□□ -1.56
SNX3O60493 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX3O60493 AC010325.3-201ENST00000641084 394 ntBASIC5.28□□□□□ -1.56
SNX3O60493 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SNX3O60493 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX3O60493 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 IFIT1P1-201ENST00000400497 1449 ntBASIC5.28□□□□□ -1.56
SNX3O60493 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
SNX3O60493 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNX3O60493 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
SNX3O60493 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNX3O60493 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 SNORA64.1-201ENST00000362600 132 ntBASIC5.27□□□□□ -1.57
SNX3O60493 SNORA64.3-201ENST00000365647 134 ntBASIC5.27□□□□□ -1.57
SNX3O60493 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNX3O60493 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
SNX3O60493 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 OOSP1-201ENST00000398992 1270 ntBASIC5.27□□□□□ -1.57
SNX3O60493 SETP15-201ENST00000412724 337 ntBASIC5.27□□□□□ -1.57
SNX3O60493 AL034379.1-201ENST00000423216 253 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms