Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 SRRM1P3-201ENST00000426911 2678 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 RNA5SP46-201ENST00000362370 120 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 RNA5SP435-201ENST00000364044 108 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 RNA5SP91-201ENST00000390902 119 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AC087752.1-201ENST00000391360 558 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 BMS1P17-202ENST00000416720 316 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 NENFP1-201ENST00000419476 466 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 OR5W1P-201ENST00000423705 938 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 SETP9-201ENST00000423837 832 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 DSTNP5-201ENST00000427921 523 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AL138787.1-202ENST00000437804 898 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 Z84478.1-201ENST00000438230 1219 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AC002504.1-201ENST00000438281 691 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 RPSAP39-201ENST00000467439 883 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 RPS3AP15-201ENST00000483874 781 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 DUTP1-201ENST00000493631 470 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 OR7E157P-201ENST00000494376 911 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AC105420.1-201ENST00000504389 582 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 NPM1P21-201ENST00000513394 762 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 IGBP1P1-201ENST00000554337 1009 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.17□□□□□ -1.58
ZIC3O60481 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 AL513327.3-201ENST00000602618 469 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.17□□□□□ -1.58
ZIC3O60481 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 FRG1DP-201ENST00000635586 771 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 AC008691.1-209ENST00000642094 814 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 MAPK10-261ENST00000641050 3109 ntBASIC5.17□□□□□ -1.58
ZIC3O60481 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZIC3O60481 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ZIC3O60481 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.16□□□□□ -1.58
ZIC3O60481 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.16□□□□□ -1.58
ZIC3O60481 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.16□□□□□ -1.58
ZIC3O60481 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 AC140479.2-201ENST00000421567 3130 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ZIC3O60481 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.16□□□□□ -1.58
ZIC3O60481 RN7SKP69-201ENST00000365390 305 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 RNA5SP131-201ENST00000365452 119 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 MIR122-201ENST00000385044 85 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 MIR130A-201ENST00000385274 89 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ZIC3O60481 RNU6-1000P-201ENST00000391066 106 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 GSTA12P-201ENST00000402398 508 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AL512422.1-201ENST00000407033 553 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.16□□□□□ -1.58
ZIC3O60481 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 RNA5SP178-201ENST00000410380 128 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 RNU4-27P-201ENST00000410889 139 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AL606495.1-201ENST00000422100 813 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 NAP1L4P2-201ENST00000425958 899 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC092651.1-201ENST00000426110 312 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms