Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC28A1O00337 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC28A1O00337 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 MRRFP1-201ENST00000435941 1675 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC28A1O00337 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 SRRM1P3-201ENST00000426911 2678 ntBASIC5.27□□□□□ -1.57
SLC28A1O00337 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC28A1O00337 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC28A1O00337 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC28A1O00337 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 SSXP3-201ENST00000442971 1300 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 MUC2-202ENST00000613187 4845 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 AC106872.5-201ENST00000508856 1416 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SLC28A1O00337 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SLC28A1O00337 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 MIR365B-201ENST00000362317 111 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 RN7SKP275-201ENST00000364626 301 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 OR1L6-202ENST00000373684 1044 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AKR1B10P1-201ENST00000425765 942 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 RPL19P16-201ENST00000433839 588 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 AC092106.1-201ENST00000444291 373 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 NPM1P19-201ENST00000450070 712 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC28A1O00337 YRDCP3-201ENST00000456507 480 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AC011476.1-201ENST00000466725 307 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AC105918.1-201ENST00000474399 838 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 HMGB3P14-201ENST00000494195 599 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 AC109464.1-201ENST00000511091 819 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC28A1O00337 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC28A1O00337 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 AC016839.1-201ENST00000578162 867 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.26□□□□□ -1.57
SLC28A1O00337 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC28A1O00337 AC006363.1-201ENST00000603806 463 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AC008833.1-201ENST00000611633 691 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AC026367.3-201ENST00000619032 590 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 AL596275.2-207ENST00000641188 675 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 OR10AB1P-202ENST00000641219 1686 ntBASIC5.26□□□□□ -1.57
SLC28A1O00337 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC28A1O00337 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC28A1O00337 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SLC28A1O00337 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SLC28A1O00337 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC28A1O00337 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SLC28A1O00337 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SLC28A1O00337 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SLC28A1O00337 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC112198.2-201ENST00000426589 6996 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SLC28A1O00337 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC28A1O00337 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC28A1O00337 HSPD1P12-201ENST00000429127 1069 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms