Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC239809.1-201ENST00000450470 217 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 HIGD1AP16-201ENST00000450986 258 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AL358876.1-201ENST00000453364 1075 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 DNAJB5P1-201ENST00000454004 806 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 EEF1A1P25-201ENST00000495704 1267 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 KHDC1P1-201ENST00000511053 508 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC022360.1-201ENST00000521058 340 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC130364.2-201ENST00000528639 604 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC023080.1-201ENST00000551663 931 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 CYCSP38-201ENST00000559840 322 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 OR1E3-201ENST00000575608 948 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC022884.2-201ENST00000578535 580 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 OR1AB1P-201ENST00000585564 761 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AP001120.4-201ENST00000590231 108 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC114477.1-201ENST00000605097 605 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AL645933.2-201ENST00000606743 1207 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC087893.2-201ENST00000623272 255 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AP006248.2-201ENST00000623309 592 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC005514.1-201ENST00000623521 208 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC061999.1-201ENST00000624454 177 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 FKBP1AP4-201ENST00000631775 336 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 EEF1A1P42-201ENST00000613436 1331 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 OFD1P15Y-201ENST00000411536 1392 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 AC010132.4-201ENST00000569883 1368 ntBASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHKB-CPT1BH3BT56 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 QRSL1P1-201ENST00000400977 1540 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 MT-RNR2-201ENST00000387347 1559 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008725.1-201ENST00000605123 2263 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 OR7A2P-201ENST00000304105 930 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RNA5SP140-201ENST00000364524 92 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 MIR3074-201ENST00000384885 81 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 MIR187-201ENST00000385062 109 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL132875.1-201ENST00000403623 949 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 NCSTNP1-201ENST00000406229 144 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL590635.1-201ENST00000406314 586 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RPL35AP31-201ENST00000418340 337 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RPSAP59-201ENST00000421048 890 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC106901.1-201ENST00000425086 698 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AHCYP8-201ENST00000425108 209 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 RPS7P14-201ENST00000426405 583 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 DPY19L1P2-201ENST00000426647 915 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC083862.1-201ENST00000427378 1242 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 VDAC2P3-201ENST00000430995 828 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 ZDHHC20P1-204ENST00000435787 423 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 GAPDHP58-201ENST00000438477 1006 ntBASIC2.84□□□□□ -1.95
CHKB-CPT1BH3BT56 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms