Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SUMO2P2-201ENST00000456482 255 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC147055.4-201ENST00000504399 745 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 IGKV2-18-201ENST00000522607 343 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AP005639.1-201ENST00000526939 192 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 MIR4801-201ENST00000582704 82 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AL352984.2-201ENST00000611153 546 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC025162.2-201ENST00000619602 560 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 TRIM51HP-202ENST00000530412 1823 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC046144.1-201ENST00000478559 1853 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 MTND4P31-201ENST00000425607 1343 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 RNA5SP477-201ENST00000362639 119 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 RN7SKP292-201ENST00000365522 317 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 RNU6-98P-201ENST00000384173 107 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 MIR16-1-201ENST00000385271 89 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 MIR143-201ENST00000385300 106 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SNORD65.1-201ENST00000390889 71 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 VDAC2P1-201ENST00000399358 958 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AL121835.1-201ENST00000404250 354 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 RN7SKP232-201ENST00000410170 290 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 Y_RNA.625-201ENST00000411256 107 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 PGBD4P8-201ENST00000412993 562 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 RAD23BP2-201ENST00000416003 1207 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC019050.1-201ENST00000418508 492 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 MTCO2P34-201ENST00000421994 607 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AL049610.1-201ENST00000423374 372 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SEPT7P5-201ENST00000434048 306 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC094019.1-201ENST00000434678 472 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AL627308.1-201ENST00000435693 821 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AL034418.1-201ENST00000448675 860 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SNX18P26-201ENST00000458433 740 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC083906.1-201ENST00000509298 406 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 RNU6-720P-201ENST00000516363 108 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AP005597.2-201ENST00000526238 341 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 MIR3135A-201ENST00000578460 77 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 BPTFP1-201ENST00000579209 492 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 WISP1-OT1-201ENST00000602893 642 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AL135786.2-201ENST00000608422 615 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC008083.4-201ENST00000615076 444 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 U1.41-201ENST00000617626 165 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AP001264.1-201ENST00000620602 703 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC138627.1-203ENST00000641872 1680 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 AC083806.2-201ENST00000617795 2685 ntBASIC7.78□□□□□ -1.16
TMEM88BA6NKF7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms