Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 MIR2117-201ENST00000516780 80 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 SOX5P1-201ENST00000524155 1127 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC138701.1-201ENST00000524329 714 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AP001804.2-201ENST00000533932 910 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 MIR3176-201ENST00000582210 90 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC245884.10-201ENST00000597355 337 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 RNU6-84P-201ENST00000607737 102 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AP000864.1-201ENST00000609424 650 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC016597.2-201ENST00000613256 341 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC005156.1-201ENST00000613371 573 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 MIR8084-201ENST00000614105 89 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AC022960.3-201ENST00000619794 441 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 AP004607.3-201ENST00000530354 3915 ntBASIC5.8□□□□□ -1.48
TBC1D3FA6NER0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 TCP1P3-201ENST00000414406 1498 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 RN7SKP160-201ENST00000363804 340 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL391422.1-201ENST00000402155 436 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL391361.1-201ENST00000405580 489 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL138787.1-202ENST00000437804 898 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 NPM1P19-201ENST00000450070 712 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 FRG2FP-204ENST00000453982 852 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 TVP23BP2-201ENST00000455082 615 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL355032.1-201ENST00000472981 438 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 RPL32P33-201ENST00000487023 394 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC008945.1-201ENST00000505144 499 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 NAMPTP2-201ENST00000505629 1115 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 OR4A17P-201ENST00000526032 904 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC090022.1-201ENST00000546569 311 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 MIR4760-201ENST00000585040 80 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 BMS1P7-201ENST00000602440 1052 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL138960.1-201ENST00000613838 513 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AC018926.1-201ENST00000616335 435 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 AL445528.2-201ENST00000620582 470 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 IMMTP1-201ENST00000435590 2219 ntBASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
TBC1D3FA6NER0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TBC1D3FA6NER0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms