Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC100832.1-201ENST00000471945 383 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 ATP5LP5-201ENST00000483050 299 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC090638.1-201ENST00000498296 909 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 ATP5LP3-201ENST00000514223 304 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 GAPDHP62-201ENST00000515313 990 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 RN7SKP99-201ENST00000517028 307 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC019322.1-201ENST00000571869 389 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC010245.2-201ENST00000606908 1167 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC109446.4-201ENST00000623235 2755 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 MAPK10-338ENST00000641647 3362 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 MTCO1P22-201ENST00000604619 1360 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 OR4F13P-202ENST00000560066 2054 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AL360270.2-201ENST00000562952 5985 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 RNA5SP234-201ENST00000363916 119 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 U3.10-201ENST00000364459 214 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC007068.1-201ENST00000396690 844 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 RN7SKP229-201ENST00000410465 302 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 Z93019.1-201ENST00000416450 973 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AL354868.1-201ENST00000417077 482 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 OR10T1P-201ENST00000424327 947 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 VTI1BP4-201ENST00000427516 527 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 RN7SL583P-201ENST00000475692 287 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 RN7SL547P-201ENST00000490793 290 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 RNU4-18P-201ENST00000516751 149 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC020937.1-201ENST00000519677 1013 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 H3F3BP2-201ENST00000583907 357 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC022467.1-201ENST00000614738 749 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC007204.2-201ENST00000615022 616 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 MIR8080-201ENST00000622224 89 ntBASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX9Q9Y5X1 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms