Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 KRTAP5-14P-201ENST00000502328 121 ntBASIC10.3□□□□□ -0.76
SHROOM4Q9ULL8 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC10.3□□□□□ -0.76
SHROOM4Q9ULL8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC10.3□□□□□ -0.76
SHROOM4Q9ULL8 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
SHROOM4Q9ULL8 ATP5J2P6-201ENST00000565203 266 ntBASIC10.3□□□□□ -0.76
SHROOM4Q9ULL8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC10.3□□□□□ -0.76
SHROOM4Q9ULL8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC10.3□□□□□ -0.76
SHROOM4Q9ULL8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 CASC19-243ENST00000641588 1546 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 SNORA70.2-201ENST00000364506 135 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 RNU6-398P-201ENST00000384143 109 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AC019050.1-201ENST00000418508 492 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 COX6CP17-201ENST00000421389 185 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 PRPF38AP2-201ENST00000438179 851 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 MTND4LP12-201ENST00000448237 295 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 SEPT14P1-201ENST00000458703 648 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 CSNK1A1P3-201ENST00000504105 330 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AC009117.1-201ENST00000563948 554 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AC091905.4-201ENST00000623432 202 ntBASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC10.29□□□□□ -0.76
SHROOM4Q9ULL8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 RN7SKP126-201ENST00000411143 300 ntBASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AC007537.2-201ENST00000472093 511 ntBASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 RN7SL205P-201ENST00000490174 284 ntBASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 RN7SL52P-201ENST00000584271 284 ntBASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 AC020910.2-201ENST00000603635 610 ntBASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 RN7SL722P-201ENST00000617780 284 ntBASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 RN7SL565P-201ENST00000618246 284 ntBASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SHROOM4Q9ULL8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC10.27□□□□□ -0.76
SHROOM4Q9ULL8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 AC068769.1-201ENST00000474767 2426 ntBASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 AC090589.1-201ENST00000473109 362 ntBASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 PMS2P3-207ENST00000529061 717 ntBASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 AL021877.2-201ENST00000624442 10684 ntBASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC10.27□□□□□ -0.77
SHROOM4Q9ULL8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 SNORA62-201ENST00000365493 153 ntBASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 GAPDHP25-201ENST00000447061 1001 ntBASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC10.26□□□□□ -0.77
SHROOM4Q9ULL8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms