Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 CASC19-264ENST00000641912 1184 ntBASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC6Q9UBN7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 PABPC1P6-201ENST00000445594 1829 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 MT-RNR1-201ENST00000389680 954 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 GAPDHP42-201ENST00000406848 981 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 NENFP1-201ENST00000419476 466 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 PTMAP6-201ENST00000439110 327 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC019185.1-201ENST00000442718 389 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 OR7E116P-201ENST00000448529 957 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AL450023.1-201ENST00000450868 751 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AL356390.1-201ENST00000455684 397 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC004129.2-201ENST00000457229 287 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 RNU1-88P-201ENST00000459274 128 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 SEPT7P6-201ENST00000469999 1143 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 EIF1P7-201ENST00000487533 337 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC008953.1-201ENST00000497334 318 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC074255.1-201ENST00000511259 501 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 HSPE1P2-201ENST00000554777 306 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AL731537.2-201ENST00000561565 951 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 BNIP3P32-201ENST00000600015 554 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC008536.1-201ENST00000602872 669 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC020923.1-201ENST00000624021 917 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AC010266.2-201ENST00000564741 3255 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 AL355488.2-201ENST00000609909 2850 ntBASIC6.34□□□□□ -1.39
HDAC6Q9UBN7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HDAC6Q9UBN7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HDAC6Q9UBN7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
HDAC6Q9UBN7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
HDAC6Q9UBN7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC068870.3-201ENST00000625077 2536 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 FBXL21-201ENST00000297158 1305 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC117409.1-201ENST00000470499 1310 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 RNA5SP319-201ENST00000362768 119 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 RNA5SP30-201ENST00000365552 115 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ADAM24P-201ENST00000398655 2101 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 METTL15P3-201ENST00000415522 1221 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC007064.3-201ENST00000422608 359 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 BX276092.6-201ENST00000430476 250 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 MTCO1P57-201ENST00000432182 261 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AL392003.1-201ENST00000434394 243 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC099670.2-201ENST00000435130 321 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 BX276092.8-201ENST00000455722 250 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AL049829.1-201ENST00000465411 156 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 RN7SL583P-201ENST00000475692 287 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms