Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 METTL15P3-201ENST00000415522 1221 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 MTND4LP7-201ENST00000431728 294 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 LDHAP2-201ENST00000437325 985 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 RPS15AP29-201ENST00000445539 400 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 RPSAP50-201ENST00000481955 852 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 RPL17P2-201ENST00000491913 451 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AC090543.1-201ENST00000492168 485 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 HMGN2P6-201ENST00000551091 273 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 BLZF2P-201ENST00000553776 1130 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 MIR4301-201ENST00000577203 66 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 MIR3691-201ENST00000578066 90 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 MIR4311-201ENST00000580794 100 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AL133247.2-201ENST00000603236 482 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AL136370.1-201ENST00000608166 691 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AL139407.1-201ENST00000613826 1175 ntBASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCFC1R1Q9NWW0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HCFC1R1Q9NWW0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HCFC1R1Q9NWW0 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HCFC1R1Q9NWW0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.84□□□□□ -1.48
HCFC1R1Q9NWW0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HCFC1R1Q9NWW0 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC011504.1-201ENST00000623331 4103 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC005294.1-201ENST00000355509 281 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 U8.4-201ENST00000363626 134 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 RN7SKP6-201ENST00000364795 319 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 MTATP6P11-201ENST00000428071 670 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 RPL12P3-201ENST00000440080 396 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 ARAFP2-201ENST00000440565 559 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 VN1R48P-201ENST00000448149 1036 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 CBX1P5-201ENST00000475330 559 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 RPS18P6-201ENST00000476880 458 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 TRBV5-2-201ENST00000489095 273 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC147055.3-201ENST00000510547 851 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 RNU6-889P-201ENST00000517189 103 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 FAM106CP-201ENST00000582212 507 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 BMS1P7-201ENST00000602440 1052 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AL136295.6-201ENST00000610486 658 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AP003499.2-201ENST00000624100 483 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 AP000550.3-201ENST00000637734 379 ntBASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCFC1R1Q9NWW0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms