Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 RNU1-146P-201ENST00000364015 165 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 SEPT7P2-202ENST00000398921 823 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 NAP1L4P2-201ENST00000425958 899 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC090018.1-201ENST00000434369 367 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 PRPF38AP1-201ENST00000451976 933 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 RN7SL51P-201ENST00000468230 285 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC100832.1-201ENST00000471945 383 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 RPL7P41-201ENST00000485823 957 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 RN7SL466P-201ENST00000497546 295 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC090286.3-201ENST00000573133 187 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AL162431.4-201ENST00000604674 411 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC091932.2-201ENST00000623014 291 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC103703.1-201ENST00000634783 663 ntBASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 MTHFD2P5-201ENST00000320415 844 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC005294.1-201ENST00000355509 281 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 U3.7-201ENST00000363668 216 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 RN7SKP153-201ENST00000365026 316 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 RPL12P9-201ENST00000412942 488 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 MRPS21P2-201ENST00000424704 264 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC104843.2-201ENST00000427666 297 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 DSTNP5-201ENST00000427921 523 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC079807.1-201ENST00000429993 481 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC104634.1-201ENST00000452720 462 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 RPL12P24-201ENST00000474907 486 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC091544.1-201ENST00000484702 348 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC022133.1-201ENST00000490961 571 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC090568.1-201ENST00000509499 856 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 RNA5SP373-201ENST00000517271 95 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC011626.1-201ENST00000604710 562 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 MIR8080-201ENST00000622224 89 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 DDX18P6-201ENST00000450119 1997 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC010266.2-201ENST00000564741 3255 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 AC006484.1-201ENST00000435086 1884 ntBASIC5.32□□□□□ -1.56
TREX1Q9NSU2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TREX1Q9NSU2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TREX1Q9NSU2 MIR589-201ENST00000385238 99 ntBASIC5.31□□□□□ -1.56
TREX1Q9NSU2 RNA5SP339-201ENST00000390987 122 ntBASIC5.31□□□□□ -1.56
TREX1Q9NSU2 COX5BP7-201ENST00000414780 274 ntBASIC5.31□□□□□ -1.56
TREX1Q9NSU2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms