Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CBX5P1-201ENST00000468470 561 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RPL7AP26-201ENST00000488538 813 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC126182.2-201ENST00000496098 339 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RN7SL34P-201ENST00000497296 270 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC068531.1-201ENST00000502398 195 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC084357.2-201ENST00000509615 275 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PRMT5P1-201ENST00000514351 598 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 IGLC5-201ENST00000519670 293 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC090136.1-201ENST00000520009 240 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RPS20-207ENST00000520627 423 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PTK2-241ENST00000522950 548 ntTSL 4 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC109635.4-202ENST00000531666 412 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RRN3P3-201ENST00000549207 578 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC124068.1-201ENST00000563131 678 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR4703-201ENST00000577728 79 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR4253-201ENST00000581187 68 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RN7SL198P-201ENST00000583190 258 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR3672-201ENST00000584290 82 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC011477.5-201ENST00000586571 259 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC013290.1-201ENST00000586960 537 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC008734.2-201ENST00000595277 477 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 Z69706.1-201ENST00000595428 547 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC104695.3-201ENST00000604052 296 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC104662.1-201ENST00000604448 511 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC113554.1-201ENST00000606284 490 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC022296.3-201ENST00000608823 403 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 Z82243.1-201ENST00000609432 473 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR6124-201ENST00000617177 85 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC092608.2-201ENST00000624427 218 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL162171.3-201ENST00000617439 3178 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 TCP11X1-202ENST00000622971 1372 ntBASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRTAP3-1Q9BYR8 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms