Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 MTND2P13-201ENST00000577438 1039 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 DHFRP1-201ENST00000579682 559 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 AC011458.1-201ENST00000604034 617 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 AC015922.4-201ENST00000612568 690 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
PKP4Q99569 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.53□□□□□ -1.52
PKP4Q99569 MRRFP1-201ENST00000435941 1675 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 MRE11P1-201ENST00000464884 2127 ntBASIC5.53□□□□□ -1.52
PKP4Q99569 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKP4Q99569 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 AC019072.1-201ENST00000604535 1551 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
PKP4Q99569 RNA5SP30-201ENST00000365552 115 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.52□□□□□ -1.53
PKP4Q99569 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PKP4Q99569 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PKP4Q99569 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 AC096921.1-201ENST00000411661 375 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 RPS6P23-201ENST00000413224 722 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AL390879.2-203ENST00000426943 1121 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.52□□□□□ -1.53
PKP4Q99569 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 MTND4P15-201ENST00000437913 1033 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.52□□□□□ -1.53
PKP4Q99569 SNORD46.2-201ENST00000516021 102 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 IGLV3-24-201ENST00000517477 197 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 MRPS16P1-201ENST00000523462 412 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AP004609.2-201ENST00000532177 190 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AC137627.1-201ENST00000545761 289 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.52□□□□□ -1.53
PKP4Q99569 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
PKP4Q99569 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.52□□□□□ -1.53
PKP4Q99569 AP001496.3-201ENST00000580230 913 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.52□□□□□ -1.53
PKP4Q99569 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.52□□□□□ -1.53
PKP4Q99569 AC023510.2-201ENST00000622162 746 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PKP4Q99569 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PKP4Q99569 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 AC106858.1-201ENST00000637497 429 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.52□□□□□ -1.53
PKP4Q99569 MIR193BHG-214ENST00000641765 509 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 AL121839.2-201ENST00000565058 6943 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.52□□□□□ -1.53
PKP4Q99569 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKP4Q99569 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.52□□□□□ -1.53
PKP4Q99569 PWAR1-201ENST00000624188 2414 ntBASIC5.52□□□□□ -1.53
PKP4Q99569 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 AC004076.2-201ENST00000620532 3323 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
PKP4Q99569 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 AL356317.1-201ENST00000396110 1436 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PKP4Q99569 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PKP4Q99569 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 RNA5SP326-201ENST00000363209 110 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 RNU6-1176P-201ENST00000390955 107 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 RNA5SP105-201ENST00000391123 113 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 AC087752.1-201ENST00000391360 558 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 DHFRP5-201ENST00000406944 564 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 RMRPP5-201ENST00000411156 267 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms