Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP1Q96SZ6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 SAMMSON-210ENST00000641260 1308 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 GNL2P1-201ENST00000451274 2190 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 SNORA27.3-201ENST00000364937 134 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 RMRPP5-201ENST00000411156 267 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AL096829.1-201ENST00000413677 457 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 VN1R31P-201ENST00000417498 730 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC007568.1-201ENST00000422912 471 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC245884.2-201ENST00000426257 404 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AL445528.1-201ENST00000426330 420 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC115283.1-201ENST00000427353 400 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 LDHAP2-201ENST00000437325 985 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 HMGN1P2-201ENST00000445197 310 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 RN7SL352P-201ENST00000466002 277 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 HMGB1P38-201ENST00000490557 577 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AOX3P-204ENST00000491025 2107 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC025458.1-201ENST00000506046 166 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC110775.1-201ENST00000513721 462 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC091163.3-201ENST00000518269 1144 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC079905.1-201ENST00000549280 475 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC009094.1-201ENST00000564443 426 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC005244.1-201ENST00000582566 339 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC005726.4-201ENST00000582858 458 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC067773.1-201ENST00000603284 1094 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC067959.1-201ENST00000604334 379 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC107952.2-201ENST00000606048 486 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC067838.1-201ENST00000606064 577 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AL512427.1-201ENST00000618593 349 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 AL603839.4-201ENST00000624658 1005 ntBASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.36□□□□□ -1.39
CDK5RAP1Q96SZ6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 DDX6P1-205ENST00000441966 1436 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 SGO1P1-201ENST00000603525 1447 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 AC104446.1-201ENST00000613728 1321 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 ICE2P1-201ENST00000512800 1849 ntBASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP1Q96SZ6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms