Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SIN3AQ96ST3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SIN3AQ96ST3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SIN3AQ96ST3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.61□□□□□ -1.19
SIN3AQ96ST3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SIN3AQ96ST3 AL137141.1-201ENST00000624622 4836 ntBASIC7.61□□□□□ -1.19
SIN3AQ96ST3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 RPS4XP16-201ENST00000427198 791 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 AC005033.1-201ENST00000428904 813 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 EEF1B2P5-201ENST00000444820 548 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 AC092647.2-201ENST00000452998 253 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 SNORA81.2-201ENST00000516868 170 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 AC026367.3-201ENST00000619032 590 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 AL590763.1-201ENST00000398297 1545 ntBASIC7.6□□□□□ -1.19
SIN3AQ96ST3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SIN3AQ96ST3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 HSPD1P12-201ENST00000429127 1069 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 MRPS21P3-201ENST00000436696 262 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 AC016772.1-201ENST00000444170 1261 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 Z92846.1-201ENST00000456203 268 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 SUMO2P15-201ENST00000604285 278 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 RNA5SP439-201ENST00000617595 124 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 BCORP1-203ENST00000513194 5093 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 CR788268.1-201ENST00000603931 1809 ntBASIC7.59□□□□□ -1.19
SIN3AQ96ST3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
SIN3AQ96ST3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AP000432.2-201ENST00000624164 2048 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 RNU1-19P-201ENST00000363306 165 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 RNU1-106P-201ENST00000384382 164 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 RPL12P9-201ENST00000412942 488 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 MARK2P12-201ENST00000420129 585 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AL354766.1-201ENST00000423396 542 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 RPL7P40-201ENST00000481703 745 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 RN7SL30P-201ENST00000488416 306 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AC006427.1-201ENST00000514359 712 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AC009597.2-201ENST00000604659 592 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 MIR6719-201ENST00000622428 87 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AC074101.1-201ENST00000637861 241 ntBASIC7.58□□□□□ -1.2
SIN3AQ96ST3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SIN3AQ96ST3 PANDAR-201ENST00000629595 1506 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SIN3AQ96ST3 AC005522.1-201ENST00000395416 346 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 MIR1182-201ENST00000408363 97 ntBASIC7.57□□□□□ -1.2
SIN3AQ96ST3 BMS1P13-201ENST00000417301 885 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms