Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RN7SL814P-201ENST00000487715 300 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 RPS4XP20-201ENST00000505751 772 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC127381.1-201ENST00000555979 939 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC008814.1-201ENST00000603797 406 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC011626.1-201ENST00000604710 562 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AL512329.2-201ENST00000607350 548 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 MIR6839-201ENST00000620425 113 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 ADAM24P-201ENST00000398655 2101 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AL034549.2-201ENST00000618285 3373 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AP001029.2-203ENST00000589795 4910 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 RNA5SP514-201ENST00000363717 111 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 RN7SKP229-201ENST00000410465 302 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 Z92846.1-201ENST00000456203 268 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 RN7SL189P-201ENST00000468631 289 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC128716.1-201ENST00000475129 166 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 RPS21P4-201ENST00000487122 248 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC006427.1-201ENST00000514359 712 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 RN7SL708P-201ENST00000580952 299 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 RN7SL753P-201ENST00000581238 290 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 MIR6826-201ENST00000617808 98 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC090527.3-201ENST00000619041 548 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC130360.2-201ENST00000533477 1556 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AC011493.1-201ENST00000596753 1632 ntBASIC4.38□□□□□ -1.71
GAFA1Q96PS6 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
GAFA1Q96PS6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 AL592429.1-201ENST00000403909 1473 ntBASIC4.37□□□□□ -1.71
GAFA1Q96PS6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GAFA1Q96PS6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms