Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 SUGT1P2-201ENST00000379452 992 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC007563.3-201ENST00000433233 371 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AL731534.1-201ENST00000434711 269 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 CST12P-201ENST00000457644 362 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 RPS4XP12-201ENST00000461747 709 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC117409.1-201ENST00000470499 1310 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 RN7SL591P-201ENST00000496150 292 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 TPM3P3-201ENST00000521343 354 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 TRIM77BP-201ENST00000524985 1119 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC027216.1-201ENST00000577726 685 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC060766.1-201ENST00000590824 627 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC108673.3-201ENST00000609183 335 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 MIR6861-201ENST00000618657 64 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC091305.2-201ENST00000624049 1576 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VMP1Q96GC9 AC119674.1-220ENST00000641502 1048 ntBASIC5.61□□□□□ -1.51
VMP1Q96GC9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 KARSP1-201ENST00000451871 1752 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 PSG10P-201ENST00000501199 1500 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 RNU6-225P-201ENST00000384613 103 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 RN7SKP166-201ENST00000410812 305 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 RPS26P13-201ENST00000419030 330 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC244453.4-201ENST00000419150 388 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 NMD3P2-201ENST00000421815 761 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 HMGN2P27-201ENST00000427352 270 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 TUBB4BP6-201ENST00000437576 479 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 GAPDHP14-201ENST00000450472 937 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 RPL23AP40-201ENST00000487630 390 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 TRBV5-2-201ENST00000489095 273 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 ACTR6P1-201ENST00000514311 1104 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC060775.1-201ENST00000518241 520 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC244502.2-201ENST00000543361 851 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC119403.2-201ENST00000590960 598 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC108865.2-201ENST00000606881 432 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC084036.1-201ENST00000609190 508 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AL365181.4-201ENST00000609800 547 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 MIR6793-201ENST00000612376 63 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AL096712.1-201ENST00000614561 159 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AL136228.1-201ENST00000622221 319 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AL359742.1-201ENST00000622497 540 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 RPL23AP61-201ENST00000623642 466 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC104260.2-201ENST00000623551 3497 ntBASIC5.6□□□□□ -1.51
VMP1Q96GC9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms