Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-334P-201ENST00000517072 102 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AC068880.4-201ENST00000623082 495 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 TCP1P3-201ENST00000414406 1498 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AC011503.2-201ENST00000594230 1500 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 C4BPAP1-201ENST00000415474 1893 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC114786.1-201ENST00000512892 1415 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 CASC19-248ENST00000641674 1356 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 RNU1-19P-201ENST00000363306 165 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 NPM1P37-201ENST00000403105 874 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 MYL6P5-201ENST00000412707 459 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AL512661.1-201ENST00000434586 1253 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AL390119.1-201ENST00000440329 312 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AL606490.1-201ENST00000452266 765 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AL022319.1-201ENST00000458183 1167 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 RN7SL610P-201ENST00000463845 291 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 RPL32P33-201ENST00000487023 394 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC002456.2-201ENST00000509356 380 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 SOX5P1-201ENST00000524155 1127 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 C1DP5-201ENST00000525775 383 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 DPPA2P4-201ENST00000563717 878 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC008536.1-201ENST00000602872 669 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC091193.1-201ENST00000604640 448 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 MIR8084-201ENST00000614105 89 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC007204.2-201ENST00000615022 616 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC009269.6-201ENST00000621778 588 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC105105.5-201ENST00000622635 1294 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 FRG1DP-201ENST00000635586 771 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC079776.5-201ENST00000641920 211 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AC011504.1-201ENST00000623331 4103 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 DNM1P47-203ENST00000571780 12667 ntBASIC5.86□□□□□ -1.47
HMGB4Q8WW32 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGB4Q8WW32 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms