Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 CASC19-248ENST00000641674 1356 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 NANOGP4-201ENST00000427230 913 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 CYCSP24-201ENST00000445119 316 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 RN7SL583P-201ENST00000475692 287 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC011411.1-201ENST00000509592 876 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 RNA5SP271-201ENST00000516700 88 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 LINC00556-201ENST00000569603 412 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 BX323046.1-201ENST00000610145 535 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AL672167.1-204ENST00000641875 3017 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AL022393.1-201ENST00000625142 1677 ntBASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC112Q8NEF3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.45
CCDC112Q8NEF3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.96□□□□□ -1.45
CCDC112Q8NEF3 AC079298.1-201ENST00000625026 1619 ntBASIC5.96□□□□□ -1.45
CCDC112Q8NEF3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.96□□□□□ -1.45
CCDC112Q8NEF3 AL354854.1-201ENST00000455940 1363 ntBASIC5.96□□□□□ -1.45
CCDC112Q8NEF3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 RNA5SP500-201ENST00000364486 119 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 MIR130B-202ENST00000385018 82 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 SNORA17A-201ENST00000391185 133 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AC104333.2-201ENST00000422630 192 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AL450023.1-201ENST00000450868 751 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 IGLV3-30-201ENST00000524362 298 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AC011445.2-201ENST00000599274 173 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AC100767.2-201ENST00000604840 693 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 SNORA17.5-201ENST00000630429 132 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AC129915.3-201ENST00000634128 948 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AF287957.1-201ENST00000607368 1595 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AC011447.7-201ENST00000624228 1590 ntBASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC112Q8NEF3 AC097063.1-201ENST00000426714 1797 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 KARSP1-201ENST00000451871 1752 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AL078595.2-201ENST00000605309 1780 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 MIR323A-201ENST00000362199 86 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 RNU1-19P-201ENST00000363306 165 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 RNA5SP178-201ENST00000410380 128 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AK4P4-201ENST00000419465 646 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC104843.2-201ENST00000427666 297 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 MTND6P12-201ENST00000428247 522 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC126120.1-201ENST00000431082 470 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 RPL31P15-201ENST00000449770 338 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 PCNAP4-201ENST00000532690 730 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 OR11H3P-201ENST00000554547 982 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms