Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AL355433.1-201ENST00000422804 300 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC009784.1-201ENST00000426484 460 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 RPS26P41-201ENST00000450370 284 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 RPL7P45-201ENST00000455851 743 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 RPS4XP14-201ENST00000493072 781 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 RPS17P5-201ENST00000498293 408 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 MORF4L2P1-201ENST00000503761 858 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC138832.1-201ENST00000522871 556 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 BLZF2P-201ENST00000553776 1130 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 H3F3BP2-201ENST00000583907 357 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 IMMP1LP3-201ENST00000604197 224 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AL162574.1-201ENST00000615702 950 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 RNA5SP335-201ENST00000363817 110 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 RNU6-171P-201ENST00000384354 107 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 MIR1178-201ENST00000408396 91 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 Z68694.1-201ENST00000413929 841 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 AL133482.1-201ENST00000415988 498 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 OR10T1P-201ENST00000424327 947 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 RN7SL214P-201ENST00000487317 265 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 RNA5SP230-201ENST00000517039 122 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 MIR1269B-201ENST00000580405 75 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 AL139041.1-201ENST00000605480 610 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RFWD3Q6PCD5 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 AL133388.1-201ENST00000404509 287 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 AL358178.1-201ENST00000407698 397 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 AL390774.1-201ENST00000411924 246 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 SMC4P1-201ENST00000414479 527 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 AL136231.1-201ENST00000429407 730 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 RPL7P56-201ENST00000429441 717 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 RPL7L1P9-201ENST00000431298 745 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 AC105399.1-202ENST00000447303 205 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 AL606490.1-201ENST00000452266 765 ntBASIC5.65□□□□□ -1.5
RFWD3Q6PCD5 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms