Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HSPG2P98160 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HSPG2P98160 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC3.15□□□□□ -1.91
HSPG2P98160 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
HSPG2P98160 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.15□□□□□ -1.91
HSPG2P98160 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HSPG2P98160 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HSPG2P98160 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HSPG2P98160 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HSPG2P98160 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HSPG2P98160 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HSPG2P98160 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 OR10T1P-201ENST00000424327 947 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 SNORA31.9-201ENST00000516429 84 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 AP003080.1-202ENST00000526526 915 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 MIR4301-201ENST00000577203 66 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC087821.1-201ENST00000623639 567 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 OR4F13P-202ENST00000560066 2054 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HSPG2P98160 RN7SKP114-201ENST00000410327 279 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC007568.1-201ENST00000422912 471 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 Z95327.1-201ENST00000446082 482 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.14□□□□□ -1.91
HSPG2P98160 AL354714.3-201ENST00000447284 493 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.14□□□□□ -1.91
HSPG2P98160 MTND2P28-201ENST00000457540 1044 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 CYCSP34-201ENST00000458172 304 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC079080.1-201ENST00000479841 822 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AK3P4-201ENST00000504283 583 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC007497.1-201ENST00000610421 561 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 AL121657.1-201ENST00000327215 531 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC116036.1-201ENST00000412199 367 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC079168.1-201ENST00000458741 345 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.14□□□□□ -1.91
HSPG2P98160 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC115286.1-201ENST00000604298 434 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC005252.1-201ENST00000604518 1063 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 ERG-205ENST00000398910 4954 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 AC009951.1-201ENST00000623674 2614 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
HSPG2P98160 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC020779.1-201ENST00000478757 796 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 RN7SL244P-201ENST00000493405 297 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC093840.1-201ENST00000511599 336 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC027807.1-201ENST00000559921 996 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.14□□□□□ -1.91
HSPG2P98160 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC3.14□□□□□ -1.91
HSPG2P98160 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC3.14□□□□□ -1.91
HSPG2P98160 AC002044.3-201ENST00000623314 541 ntBASIC3.14□□□□□ -1.91
HSPG2P98160 AP003400.2-201ENST00000624036 666 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 283.9 ms