Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 RNA5SP510-201ENST00000364697 99 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 TRAV35-201ENST00000390462 330 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AL391422.1-201ENST00000402155 436 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 Z93019.1-201ENST00000416450 973 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 PRUNEP1-201ENST00000425846 705 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC073909.1-201ENST00000447112 999 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC105399.1-202ENST00000447303 205 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 CBX1P2-201ENST00000453841 458 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 SEPT7P3-201ENST00000455017 621 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC092754.1-201ENST00000472975 479 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC023424.1-201ENST00000496058 459 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC138409.2-202ENST00000507274 458 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC098976.1-201ENST00000513014 541 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 FO393422.1-201ENST00000603908 708 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 FAM72A-208ENST00000607379 1139 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 AC109583.2-201ENST00000617367 129 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H3AP68431 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 ABCC13-202ENST00000463099 3842 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 PCAT14-202ENST00000627127 3935 ntBASIC4.73□□□□□ -1.65
HIST1H3AP68431 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HIST1H3AP68431 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC008079.2-201ENST00000623543 20396 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC124944.2-201ENST00000429866 1242 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AP000281.1-201ENST00000444036 316 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 RPL36AP39-201ENST00000445859 318 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 RPL31P15-201ENST00000449770 338 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 RPS12P31-201ENST00000491419 398 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 EIF3LP3-201ENST00000495197 822 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 IMPA1P1-201ENST00000510718 842 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 SCARNA16.4-201ENST00000516956 187 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC060766.1-201ENST00000590824 627 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC127024.6-201ENST00000621598 424 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 AC099654.6-201ENST00000636487 512 ntBASIC4.72□□□□□ -1.65
HIST1H3AP68431 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H3AP68431 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HIST1H3AP68431 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms