Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.77□□□□□ -1.65
UBA52P62987 RNA5SP103-201ENST00000459503 118 ntBASIC4.77□□□□□ -1.65
UBA52P62987 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 MYL12BP2-201ENST00000503948 512 ntBASIC4.77□□□□□ -1.65
UBA52P62987 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AC074087.1-201ENST00000512059 724 ntBASIC4.77□□□□□ -1.65
UBA52P62987 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.77□□□□□ -1.65
UBA52P62987 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 HMGN2P36-201ENST00000529541 409 ntBASIC4.77□□□□□ -1.65
UBA52P62987 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.77□□□□□ -1.65
UBA52P62987 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.77□□□□□ -1.65
UBA52P62987 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.77□□□□□ -1.65
UBA52P62987 AC079395.2-201ENST00000610982 737 ntBASIC4.77□□□□□ -1.65
UBA52P62987 AL035661.1-201ENST00000620459 1144 ntBASIC4.77□□□□□ -1.65
UBA52P62987 AP001642.1-201ENST00000624727 2117 ntBASIC4.77□□□□□ -1.65
UBA52P62987 AL078595.2-201ENST00000605309 1780 ntBASIC4.77□□□□□ -1.65
UBA52P62987 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 AC020633.1-201ENST00000468439 2247 ntBASIC4.77□□□□□ -1.65
UBA52P62987 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 AC093591.2-201ENST00000565254 3843 ntBASIC4.77□□□□□ -1.65
UBA52P62987 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 AC053481.2-202ENST00000582394 1500 ntBASIC4.77□□□□□ -1.65
UBA52P62987 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBA52P62987 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
UBA52P62987 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
UBA52P62987 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
UBA52P62987 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
UBA52P62987 OR10R3P-201ENST00000361688 942 ntBASIC4.76□□□□□ -1.65
UBA52P62987 RN7SKP162-201ENST00000363605 345 ntBASIC4.76□□□□□ -1.65
UBA52P62987 SNORA74A-201ENST00000364089 198 ntBASIC4.76□□□□□ -1.65
UBA52P62987 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.76□□□□□ -1.65
UBA52P62987 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.76□□□□□ -1.65
UBA52P62987 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 RPL34P6-201ENST00000432390 345 ntBASIC4.76□□□□□ -1.65
UBA52P62987 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.76□□□□□ -1.65
UBA52P62987 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.76□□□□□ -1.65
UBA52P62987 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.76□□□□□ -1.65
UBA52P62987 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.76□□□□□ -1.65
UBA52P62987 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.76□□□□□ -1.65
UBA52P62987 AC245028.2-201ENST00000458673 253 ntBASIC4.76□□□□□ -1.65
UBA52P62987 AC021660.1-201ENST00000465006 554 ntBASIC4.76□□□□□ -1.65
UBA52P62987 SIAH1P1-201ENST00000479411 923 ntBASIC4.76□□□□□ -1.65
UBA52P62987 RPL38P3-201ENST00000484463 213 ntBASIC4.76□□□□□ -1.65
UBA52P62987 RPS17P5-201ENST00000498293 408 ntBASIC4.76□□□□□ -1.65
UBA52P62987 AC008629.2-201ENST00000503783 483 ntBASIC4.76□□□□□ -1.65
UBA52P62987 DUTP7-201ENST00000507982 486 ntBASIC4.76□□□□□ -1.65
UBA52P62987 AC138866.2-201ENST00000508650 584 ntBASIC4.76□□□□□ -1.65
UBA52P62987 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.76□□□□□ -1.65
UBA52P62987 RNA5SP34-201ENST00000516887 130 ntBASIC4.76□□□□□ -1.65
UBA52P62987 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.76□□□□□ -1.65
UBA52P62987 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.76□□□□□ -1.65
UBA52P62987 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.76□□□□□ -1.65
UBA52P62987 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.76□□□□□ -1.65
UBA52P62987 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.76□□□□□ -1.65
UBA52P62987 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.76□□□□□ -1.65
UBA52P62987 DPRXP4-201ENST00000578053 568 ntBASIC4.76□□□□□ -1.65
UBA52P62987 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.76□□□□□ -1.65
UBA52P62987 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.76□□□□□ -1.65
UBA52P62987 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.76□□□□□ -1.65
UBA52P62987 MIR6730-201ENST00000622213 67 ntBASIC4.76□□□□□ -1.65
UBA52P62987 AC087565.3-203ENST00000641018 837 ntBASIC4.76□□□□□ -1.65
UBA52P62987 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
UBA52P62987 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.76□□□□□ -1.65
UBA52P62987 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBA52P62987 AL360270.2-201ENST00000562952 5985 ntBASIC4.76□□□□□ -1.65
UBA52P62987 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.76□□□□□ -1.65
UBA52P62987 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UBA52P62987 AC005261.2-201ENST00000593427 4258 ntBASIC4.75□□□□□ -1.65
UBA52P62987 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBA52P62987 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UBA52P62987 FBXL21-201ENST00000297158 1305 ntBASIC4.75□□□□□ -1.65
UBA52P62987 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBA52P62987 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
UBA52P62987 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.75□□□□□ -1.65
UBA52P62987 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBA52P62987 RN7SKP77-201ENST00000363261 353 ntBASIC4.75□□□□□ -1.65
UBA52P62987 RNA5SP394-201ENST00000364216 119 ntBASIC4.75□□□□□ -1.65
UBA52P62987 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBA52P62987 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
UBA52P62987 MIR937-201ENST00000401271 86 ntBASIC4.75□□□□□ -1.65
UBA52P62987 NPM1P4-201ENST00000414095 812 ntBASIC4.75□□□□□ -1.65
UBA52P62987 BMS1P17-202ENST00000416720 316 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms