Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.11□□□□□ -1.59
LIM2P55344 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.11□□□□□ -1.59
LIM2P55344 AC130364.2-201ENST00000528639 604 ntBASIC5.11□□□□□ -1.59
LIM2P55344 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.11□□□□□ -1.59
LIM2P55344 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.11□□□□□ -1.59
LIM2P55344 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.11□□□□□ -1.59
LIM2P55344 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.11□□□□□ -1.59
LIM2P55344 OOSP1P2-201ENST00000579644 351 ntBASIC5.11□□□□□ -1.59
LIM2P55344 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.11□□□□□ -1.59
LIM2P55344 AL022394.1-201ENST00000606979 292 ntBASIC5.11□□□□□ -1.59
LIM2P55344 AC079395.2-201ENST00000610982 737 ntBASIC5.11□□□□□ -1.59
LIM2P55344 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.11□□□□□ -1.59
LIM2P55344 AC005840.5-201ENST00000619166 599 ntBASIC5.11□□□□□ -1.59
LIM2P55344 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LIM2P55344 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.11□□□□□ -1.59
LIM2P55344 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.11□□□□□ -1.59
LIM2P55344 CR383656.5-201ENST00000547616 1340 ntBASIC5.11□□□□□ -1.59
LIM2P55344 AC003973.3-201ENST00000624863 2822 ntBASIC5.11□□□□□ -1.59
LIM2P55344 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LIM2P55344 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIM2P55344 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIM2P55344 ICE2P1-201ENST00000512800 1849 ntBASIC5.11□□□□□ -1.59
LIM2P55344 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.11□□□□□ -1.59
LIM2P55344 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LIM2P55344 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIM2P55344 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LIM2P55344 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIM2P55344 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
LIM2P55344 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIM2P55344 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.1□□□□□ -1.59
LIM2P55344 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
LIM2P55344 RN7SKP160-201ENST00000363804 340 ntBASIC5.1□□□□□ -1.59
LIM2P55344 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 RNU1-77P-201ENST00000390868 162 ntBASIC5.1□□□□□ -1.59
LIM2P55344 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.1□□□□□ -1.59
LIM2P55344 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.1□□□□□ -1.59
LIM2P55344 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.1□□□□□ -1.59
LIM2P55344 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.1□□□□□ -1.59
LIM2P55344 CDY11P-201ENST00000447168 1651 ntBASIC5.1□□□□□ -1.59
LIM2P55344 PPIAP20-201ENST00000449839 135 ntBASIC5.1□□□□□ -1.59
LIM2P55344 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.1□□□□□ -1.59
LIM2P55344 SEPT14P1-201ENST00000458703 648 ntBASIC5.1□□□□□ -1.59
LIM2P55344 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.1□□□□□ -1.59
LIM2P55344 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.1□□□□□ -1.59
LIM2P55344 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.1□□□□□ -1.59
LIM2P55344 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.1□□□□□ -1.59
LIM2P55344 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.1□□□□□ -1.59
LIM2P55344 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.1□□□□□ -1.59
LIM2P55344 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.1□□□□□ -1.59
LIM2P55344 AC005341.1-201ENST00000571086 708 ntBASIC5.1□□□□□ -1.59
LIM2P55344 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LIM2P55344 RBM22P1-201ENST00000578589 1214 ntBASIC5.1□□□□□ -1.59
LIM2P55344 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIM2P55344 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIM2P55344 RN7SL356P-201ENST00000582228 248 ntBASIC5.1□□□□□ -1.59
LIM2P55344 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.1□□□□□ -1.59
LIM2P55344 AC108738.1-201ENST00000603703 237 ntBASIC5.1□□□□□ -1.59
LIM2P55344 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.1□□□□□ -1.59
LIM2P55344 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.1□□□□□ -1.59
LIM2P55344 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.1□□□□□ -1.59
LIM2P55344 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIM2P55344 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIM2P55344 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LIM2P55344 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIM2P55344 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIM2P55344 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.09□□□□□ -1.59
LIM2P55344 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
LIM2P55344 AC002525.1-201ENST00000624392 1622 ntBASIC5.09□□□□□ -1.59
LIM2P55344 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LIM2P55344 AP000473.2-201ENST00000602659 1537 ntBASIC5.09□□□□□ -1.59
LIM2P55344 AC233968.1-201ENST00000611212 1300 ntBASIC5.09□□□□□ -1.59
LIM2P55344 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIM2P55344 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.09□□□□□ -1.59
LIM2P55344 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LIM2P55344 AC009804.1-201ENST00000400949 179 ntBASIC5.09□□□□□ -1.59
LIM2P55344 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.09□□□□□ -1.59
LIM2P55344 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.09□□□□□ -1.59
LIM2P55344 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.09□□□□□ -1.59
LIM2P55344 DSTNP5-201ENST00000427921 523 ntBASIC5.09□□□□□ -1.59
LIM2P55344 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.09□□□□□ -1.59
LIM2P55344 KATNBL1P2-201ENST00000433311 835 ntBASIC5.09□□□□□ -1.59
LIM2P55344 CYCSP6-201ENST00000434498 302 ntBASIC5.09□□□□□ -1.59
LIM2P55344 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.09□□□□□ -1.59
LIM2P55344 SPRYD7P1-201ENST00000443861 570 ntBASIC5.09□□□□□ -1.59
LIM2P55344 GAPDHP25-201ENST00000447061 1001 ntBASIC5.09□□□□□ -1.59
LIM2P55344 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LIM2P55344 SIAH1P1-201ENST00000479411 923 ntBASIC5.09□□□□□ -1.59
LIM2P55344 RN7SL447P-201ENST00000494711 245 ntBASIC5.09□□□□□ -1.59
LIM2P55344 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.09□□□□□ -1.59
LIM2P55344 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIM2P55344 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.09□□□□□ -1.59
LIM2P55344 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.09□□□□□ -1.59
LIM2P55344 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms