Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH4P55283 RNA5SP339-201ENST00000390987 122 ntBASIC5.56□□□□□ -1.52
CDH4P55283 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 RNA5SP487-201ENST00000410186 122 ntBASIC5.56□□□□□ -1.52
CDH4P55283 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 CBX1P3-201ENST00000413296 527 ntBASIC5.56□□□□□ -1.52
CDH4P55283 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH4P55283 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH4P55283 RPL7L1P9-201ENST00000431298 745 ntBASIC5.56□□□□□ -1.52
CDH4P55283 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 RPS11P7-201ENST00000442125 465 ntBASIC5.56□□□□□ -1.52
CDH4P55283 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 AC092754.1-201ENST00000472975 479 ntBASIC5.56□□□□□ -1.52
CDH4P55283 AC017007.3-201ENST00000479865 435 ntBASIC5.56□□□□□ -1.52
CDH4P55283 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH4P55283 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH4P55283 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.56□□□□□ -1.52
CDH4P55283 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH4P55283 AC090022.1-201ENST00000546569 311 ntBASIC5.56□□□□□ -1.52
CDH4P55283 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH4P55283 AL049779.2-201ENST00000553847 315 ntBASIC5.56□□□□□ -1.52
CDH4P55283 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH4P55283 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH4P55283 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH4P55283 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH4P55283 AC010487.1-201ENST00000594408 1172 ntBASIC5.56□□□□□ -1.52
CDH4P55283 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 AC074101.1-201ENST00000637861 241 ntBASIC5.56□□□□□ -1.52
CDH4P55283 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH4P55283 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH4P55283 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH4P55283 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH4P55283 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDH4P55283 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH4P55283 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 AC007938.2-201ENST00000604666 2634 ntBASIC5.55□□□□□ -1.52
CDH4P55283 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH4P55283 DBIP1-201ENST00000401435 260 ntBASIC5.55□□□□□ -1.52
CDH4P55283 MIR1286-201ENST00000408112 78 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH4P55283 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH4P55283 MARK2P12-201ENST00000420129 585 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AC138761.5-201ENST00000433967 325 ntBASIC5.55□□□□□ -1.52
CDH4P55283 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 NDUFB4P8-201ENST00000435351 367 ntBASIC5.55□□□□□ -1.52
CDH4P55283 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 RPS26P41-201ENST00000450370 284 ntBASIC5.55□□□□□ -1.52
CDH4P55283 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 AC108751.3-201ENST00000461814 1020 ntBASIC5.55□□□□□ -1.52
CDH4P55283 COPS8P2-201ENST00000473228 627 ntBASIC5.55□□□□□ -1.52
CDH4P55283 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH4P55283 SCARNA21.2-201ENST00000516600 166 ntBASIC5.55□□□□□ -1.52
CDH4P55283 RN7SKP5-201ENST00000517045 272 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AC079064.1-201ENST00000528365 362 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 AP004607.2-201ENST00000533949 322 ntBASIC5.55□□□□□ -1.52
CDH4P55283 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH4P55283 OR11H3P-201ENST00000554547 982 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 RBM22P1-201ENST00000578589 1214 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH4P55283 RN7SL356P-201ENST00000582228 248 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AP000769.2-201ENST00000602344 396 ntBASIC5.55□□□□□ -1.52
CDH4P55283 SUMO2P15-201ENST00000604285 278 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AL161912.3-201ENST00000605404 628 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AL512624.1-201ENST00000613638 469 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AC109583.2-201ENST00000617367 129 ntBASIC5.55□□□□□ -1.52
CDH4P55283 AC135068.5-201ENST00000624197 983 ntBASIC5.55□□□□□ -1.52
CDH4P55283 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH4P55283 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDH4P55283 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH4P55283 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms