Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPS26P41-201ENST00000450370 284 ntBASIC5.45□□□□□ -1.54
PDX1P52945 RN7SL172P-201ENST00000460535 303 ntBASIC5.45□□□□□ -1.54
PDX1P52945 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.45□□□□□ -1.54
PDX1P52945 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.45□□□□□ -1.54
PDX1P52945 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.45□□□□□ -1.54
PDX1P52945 FAM60CP-201ENST00000591086 664 ntBASIC5.45□□□□□ -1.54
PDX1P52945 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.45□□□□□ -1.54
PDX1P52945 AC005520.3-201ENST00000602874 370 ntBASIC5.45□□□□□ -1.54
PDX1P52945 AC024940.4-201ENST00000605507 246 ntBASIC5.45□□□□□ -1.54
PDX1P52945 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 AL031658.2-201ENST00000616850 651 ntBASIC5.45□□□□□ -1.54
PDX1P52945 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.45□□□□□ -1.54
PDX1P52945 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.45□□□□□ -1.54
PDX1P52945 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDX1P52945 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PDX1P52945 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
PDX1P52945 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PDX1P52945 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDX1P52945 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDX1P52945 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.44□□□□□ -1.54
PDX1P52945 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDX1P52945 LINC01963-201ENST00000562038 3148 ntBASIC5.44□□□□□ -1.54
PDX1P52945 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.44□□□□□ -1.54
PDX1P52945 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDX1P52945 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 RNU6-819P-201ENST00000364116 107 ntBASIC5.44□□□□□ -1.54
PDX1P52945 RN7SKP28-201ENST00000364770 305 ntBASIC5.44□□□□□ -1.54
PDX1P52945 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PDX1P52945 AC005042.1-201ENST00000393397 800 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC096644.3-201ENST00000416788 338 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC007064.3-201ENST00000422608 359 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC106901.1-201ENST00000425086 698 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC021876.1-201ENST00000425959 359 ntBASIC5.44□□□□□ -1.54
PDX1P52945 RPL7L1P9-201ENST00000431298 745 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 AC096775.1-201ENST00000437724 448 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC006335.2-201ENST00000437993 330 ntBASIC5.44□□□□□ -1.54
PDX1P52945 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.44□□□□□ -1.54
PDX1P52945 RN7SL222P-201ENST00000476452 299 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC079841.1-201ENST00000481228 950 ntBASIC5.44□□□□□ -1.54
PDX1P52945 RN7SL808P-201ENST00000496066 299 ntBASIC5.44□□□□□ -1.54
PDX1P52945 PGAM1P13-201ENST00000507497 754 ntBASIC5.44□□□□□ -1.54
PDX1P52945 ST13P12-201ENST00000508958 1094 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC074255.1-201ENST00000511259 501 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.44□□□□□ -1.54
PDX1P52945 CDC42P3-201ENST00000518493 633 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC104997.1-201ENST00000519761 717 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.44□□□□□ -1.54
PDX1P52945 OR10G5P-201ENST00000532733 358 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.44□□□□□ -1.54
PDX1P52945 AL445222.1-201ENST00000607259 628 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AP005131.7-201ENST00000610087 611 ntBASIC5.44□□□□□ -1.54
PDX1P52945 AC132068.1-201ENST00000623805 459 ntBASIC5.44□□□□□ -1.54
PDX1P52945 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.44□□□□□ -1.54
PDX1P52945 CASC19-222ENST00000641321 1173 ntBASIC5.44□□□□□ -1.54
PDX1P52945 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDX1P52945 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDX1P52945 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.44□□□□□ -1.54
PDX1P52945 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDX1P52945 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PDX1P52945 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.43□□□□□ -1.54
PDX1P52945 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.43□□□□□ -1.54
PDX1P52945 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PDX1P52945 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 AC011933.2-201ENST00000578539 2790 ntBASIC5.43□□□□□ -1.54
PDX1P52945 AL078595.2-201ENST00000605309 1780 ntBASIC5.43□□□□□ -1.54
PDX1P52945 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDX1P52945 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDX1P52945 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 MIR130A-201ENST00000385274 89 ntBASIC5.43□□□□□ -1.54
PDX1P52945 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDX1P52945 AL645927.1-201ENST00000396783 406 ntBASIC5.43□□□□□ -1.54
PDX1P52945 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDX1P52945 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.43□□□□□ -1.54
PDX1P52945 AC245047.2-201ENST00000441060 530 ntBASIC5.43□□□□□ -1.54
PDX1P52945 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.43□□□□□ -1.54
PDX1P52945 RPL12P39-201ENST00000455456 496 ntBASIC5.43□□□□□ -1.54
PDX1P52945 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.43□□□□□ -1.54
PDX1P52945 RN7SL329P-201ENST00000467740 299 ntBASIC5.43□□□□□ -1.54
PDX1P52945 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.43□□□□□ -1.54
PDX1P52945 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.43□□□□□ -1.54
PDX1P52945 AC105384.2-201ENST00000508433 640 ntBASIC5.43□□□□□ -1.54
PDX1P52945 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PDX1P52945 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms