Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 AC245517.2-201ENST00000442890 346 ntBASIC7.33□□□□□ -1.24
USP11P51784 AC005297.1-201ENST00000444765 862 ntBASIC7.33□□□□□ -1.24
USP11P51784 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 AC073072.2-201ENST00000447425 348 ntBASIC7.33□□□□□ -1.24
USP11P51784 AP000542.1-201ENST00000448473 371 ntBASIC7.33□□□□□ -1.24
USP11P51784 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 NDUFB4P12-201ENST00000513465 390 ntBASIC7.33□□□□□ -1.24
USP11P51784 AC116917.1-201ENST00000520558 305 ntBASIC7.33□□□□□ -1.24
USP11P51784 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 AP001000.1-201ENST00000526843 742 ntBASIC7.33□□□□□ -1.24
USP11P51784 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
USP11P51784 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 TPRX1P1-201ENST00000557620 319 ntBASIC7.33□□□□□ -1.24
USP11P51784 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 MIR548S-201ENST00000581352 82 ntBASIC7.33□□□□□ -1.24
USP11P51784 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.33□□□□□ -1.24
USP11P51784 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 VN1R81P-201ENST00000602085 372 ntBASIC7.33□□□□□ -1.24
USP11P51784 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.33□□□□□ -1.24
USP11P51784 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.33□□□□□ -1.24
USP11P51784 AC012368.3-201ENST00000604190 219 ntBASIC7.33□□□□□ -1.24
USP11P51784 AC091965.4-201ENST00000607691 587 ntBASIC7.33□□□□□ -1.24
USP11P51784 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 MRPL57P1-201ENST00000621486 265 ntBASIC7.33□□□□□ -1.24
USP11P51784 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.33□□□□□ -1.24
USP11P51784 AL356121.2-201ENST00000624715 780 ntBASIC7.33□□□□□ -1.24
USP11P51784 FP325313.1-201ENST00000638228 703 ntBASIC7.33□□□□□ -1.24
USP11P51784 CASC19-264ENST00000641912 1184 ntBASIC7.33□□□□□ -1.24
USP11P51784 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
USP11P51784 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.32□□□□□ -1.24
USP11P51784 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
USP11P51784 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 AL359694.2-201ENST00000567753 1615 ntBASIC7.32□□□□□ -1.24
USP11P51784 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USP11P51784 RNFT1P3-201ENST00000340898 1052 ntBASIC7.32□□□□□ -1.24
USP11P51784 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USP11P51784 RNA5SP512-201ENST00000364550 120 ntBASIC7.32□□□□□ -1.24
USP11P51784 OOSP1-201ENST00000398992 1270 ntBASIC7.32□□□□□ -1.24
USP11P51784 RPS3AP24-201ENST00000407896 734 ntBASIC7.32□□□□□ -1.24
USP11P51784 RNU2-16P-201ENST00000410712 136 ntBASIC7.32□□□□□ -1.24
USP11P51784 AL161449.1-201ENST00000414531 1199 ntBASIC7.32□□□□□ -1.24
USP11P51784 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.32□□□□□ -1.24
USP11P51784 RPL12P43-201ENST00000420608 499 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC004074.1-201ENST00000421810 1063 ntBASIC7.32□□□□□ -1.24
USP11P51784 RPL7AP51-201ENST00000422016 760 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.32□□□□□ -1.24
USP11P51784 AL139415.2-201ENST00000431968 163 ntBASIC7.32□□□□□ -1.24
USP11P51784 MTND1P32-201ENST00000433043 938 ntBASIC7.32□□□□□ -1.24
USP11P51784 LINC00328-2P-201ENST00000436585 219 ntBASIC7.32□□□□□ -1.24
USP11P51784 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.32□□□□□ -1.24
USP11P51784 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 RPL31P20-201ENST00000449593 360 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC098818.1-201ENST00000478593 252 ntBASIC7.32□□□□□ -1.24
USP11P51784 OR2A3P-201ENST00000493774 953 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.32□□□□□ -1.24
USP11P51784 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.32□□□□□ -1.24
USP11P51784 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.32□□□□□ -1.24
USP11P51784 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.32□□□□□ -1.24
USP11P51784 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms