Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX2P48431 RPL11P4-201ENST00000332269 436 ntBASIC5.25□□□□□ -1.57
SOX2P48431 RNU5B-1-201ENST00000363286 116 ntBASIC5.25□□□□□ -1.57
SOX2P48431 U3.10-201ENST00000364459 214 ntBASIC5.25□□□□□ -1.57
SOX2P48431 RNA5SP85-201ENST00000365378 119 ntBASIC5.25□□□□□ -1.57
SOX2P48431 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 AL603865.2-201ENST00000401679 213 ntBASIC5.25□□□□□ -1.57
SOX2P48431 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.25□□□□□ -1.57
SOX2P48431 MIR1266-201ENST00000408125 84 ntBASIC5.25□□□□□ -1.57
SOX2P48431 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
SOX2P48431 UBTFL2-201ENST00000411859 1191 ntBASIC5.25□□□□□ -1.57
SOX2P48431 MTCO2P21-201ENST00000419780 677 ntBASIC5.25□□□□□ -1.57
SOX2P48431 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX2P48431 OR5W1P-201ENST00000423705 938 ntBASIC5.25□□□□□ -1.57
SOX2P48431 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX2P48431 MTCYBP12-201ENST00000440559 1134 ntBASIC5.25□□□□□ -1.57
SOX2P48431 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 OR10R1P-201ENST00000441524 1141 ntBASIC5.25□□□□□ -1.57
SOX2P48431 OR2L9P-201ENST00000444456 913 ntBASIC5.25□□□□□ -1.57
SOX2P48431 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.25□□□□□ -1.57
SOX2P48431 Z73417.1-201ENST00000447373 778 ntBASIC5.25□□□□□ -1.57
SOX2P48431 AL096803.2-201ENST00000450032 677 ntBASIC5.25□□□□□ -1.57
SOX2P48431 NPM1P9-201ENST00000453156 844 ntBASIC5.25□□□□□ -1.57
SOX2P48431 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.25□□□□□ -1.57
SOX2P48431 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX2P48431 AC004890.1-201ENST00000461005 181 ntBASIC5.25□□□□□ -1.57
SOX2P48431 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX2P48431 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX2P48431 AC026414.1-201ENST00000504046 698 ntBASIC5.25□□□□□ -1.57
SOX2P48431 HPRT1P1-201ENST00000509498 657 ntBASIC5.25□□□□□ -1.57
SOX2P48431 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX2P48431 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 AC136777.2-201ENST00000522979 358 ntBASIC5.25□□□□□ -1.57
SOX2P48431 UBTFL10-201ENST00000528532 562 ntBASIC5.25□□□□□ -1.57
SOX2P48431 AP000619.2-201ENST00000546014 969 ntBASIC5.25□□□□□ -1.57
SOX2P48431 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX2P48431 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX2P48431 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 AC026898.1-201ENST00000586404 571 ntBASIC5.25□□□□□ -1.57
SOX2P48431 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 AC245036.5-201ENST00000596330 847 ntBASIC5.25□□□□□ -1.57
SOX2P48431 VN1R87P-201ENST00000596706 487 ntBASIC5.25□□□□□ -1.57
SOX2P48431 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX2P48431 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX2P48431 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX2P48431 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX2P48431 AC120349.3-201ENST00000624377 529 ntBASIC5.25□□□□□ -1.57
SOX2P48431 CLUHP10-201ENST00000631979 980 ntBASIC5.25□□□□□ -1.57
SOX2P48431 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SOX2P48431 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX2P48431 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX2P48431 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX2P48431 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX2P48431 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX2P48431 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 AL132640.2-201ENST00000559968 1698 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AL355578.1-201ENST00000607405 1328 ntBASIC5.24□□□□□ -1.57
SOX2P48431 GVINP1-202ENST00000531871 7271 ntBASIC5.24□□□□□ -1.57
SOX2P48431 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 WDR95P-201ENST00000425638 1542 ntBASIC5.24□□□□□ -1.57
SOX2P48431 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.24□□□□□ -1.57
SOX2P48431 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
SOX2P48431 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 RN7SKP128-201ENST00000364270 303 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 AL034403.1-201ENST00000399414 885 ntBASIC5.24□□□□□ -1.57
SOX2P48431 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 RN7SKP144-201ENST00000411108 279 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC245096.1-201ENST00000413104 546 ntBASIC5.24□□□□□ -1.57
SOX2P48431 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 RPS15AP30-201ENST00000420976 390 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC005189.1-201ENST00000431286 310 ntBASIC5.24□□□□□ -1.57
SOX2P48431 SETP8-201ENST00000435341 628 ntBASIC5.24□□□□□ -1.57
SOX2P48431 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 AC000041.1-201ENST00000439655 175 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 HMGB1P5-202ENST00000451497 985 ntBASIC5.24□□□□□ -1.57
SOX2P48431 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.24□□□□□ -1.57
SOX2P48431 AC023245.1-201ENST00000468501 517 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 AC079080.1-201ENST00000479841 822 ntBASIC5.24□□□□□ -1.57
SOX2P48431 MTCO3P35-201ENST00000485582 781 ntBASIC5.24□□□□□ -1.57
SOX2P48431 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.24□□□□□ -1.57
SOX2P48431 AC015524.1-201ENST00000491585 472 ntBASIC5.24□□□□□ -1.57
SOX2P48431 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms